Difference between revisions of "RXN-11060"

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(Created page with "Category:reaction == Reaction RXN-12611 == * direction: ** left-to-right * common-name: ** thiamin phosphate synthase ** thiamine phosphate synthase * ec-number: ** [http:...")
(Created page with "Category:reaction == Reaction ACETYL-COA-CARBOXYLTRANSFER-RXN == * direction: ** left-to-right * common-name: ** acetyl-coa carboxylase * ec-number: ** [http://enzyme.expa...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-12611 ==
+
== Reaction ACETYL-COA-CARBOXYLTRANSFER-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** thiamin phosphate synthase
+
** acetyl-coa carboxylase
−
** thiamine phosphate synthase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.5.1.3 ec-2.5.1.3]
+
** [http://enzyme.expasy.org/EC/6.4.1.2 ec-6.4.1.2]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP]][c] '''+''' 1 [[CPD-13575]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[THIAMINE-P]][c]
+
* 1 [[ACETYL-COA]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ18183]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ12870]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ12670]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ14529]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ20500]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ00484]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ17987]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ06726]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ14528]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ02214]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ00485]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6894]], thiamine diphosphate biosynthesis I (E. coli):
+
* [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast):
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''7''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-6679]], jadomycin biosynthesis:
 +
** '''1''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR95219
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=47845 47845]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11309 11309]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00742 R00742]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=thiamin phosphate synthase|thiamine phosphate synthase}}
+
{{#set: common-name=acetyl-coa carboxylase}}
−
{{#set: ec-number=ec-2.5.1.3}}
+
{{#set: ec-number=ec-6.4.1.2}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=9}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 08:36, 15 March 2021

Reaction ACETYL-COA-CARBOXYLTRANSFER-RXN

  • direction:
    • left-to-right
  • common-name:
    • acetyl-coa carboxylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7388, octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast):
    • 7 reactions found over 11 reactions in the full pathway
  • PWY-6679, jadomycin biosynthesis:
    • 1 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR95219
  • RHEA:
  • LIGAND-RXN:





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