Difference between revisions of "RXN-11210"

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(Created page with "Category:reaction == Reaction RXN490-3641 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.14.11.57 ec-1.14.11.57] * synonymous: ** proline...")
(Created page with "Category:reaction == Reaction ExchangeSeed-NA+ == * direction: ** reversible == Reaction formula == * 1.0 NA+[C-BOUNDARY] '''<=>''' 1.0 NA+[e] == Gene(s) associate...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN490-3641 ==
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== Reaction ExchangeSeed-NA+ ==
 
* direction:
 
* direction:
−
** left-to-right
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** reversible
−
* ec-number:
 
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** [http://enzyme.expasy.org/EC/1.14.11.57 ec-1.14.11.57]
 
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* synonymous:
 
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** proline hydroxylase
 
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** proline,2-oxoglutarate 4-dioxygenase
 
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** prolyl 4-hydroxylase
 
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** prolyl hydroxylase
 
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** protocollagen hydroxylase
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PRO]][c] '''=>''' 1 [[4-HYDROXY-L-PROLINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c]
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* 1.0 [[NA+]][C-BOUNDARY] '''<=>''' 1.0 [[NA+]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ10762]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ20526]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ20511]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
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{{#set: direction=reversible}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=51509 51509]
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{{#set: nb gene associated=0}}
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R01252 R01252]
 
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{{#set: direction=left-to-right}}
 
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{{#set: ec-number=ec-1.14.11.57}}
 
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{{#set: synonymous=proline,2-oxoglutarate 4-dioxygenase|proline hydroxylase|prolyl 4-hydroxylase|prolyl hydroxylase|protocollagen hydroxylase}}
 
−
{{#set: nb gene associated=3}}
 
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=manual}}
−
{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction tool=curation}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=import_from_medium}}

Revision as of 13:15, 14 January 2021

Reaction ExchangeSeed-NA+

  • direction:
    • reversible

Reaction formula

  • 1.0 NA+[C-BOUNDARY] <=> 1.0 NA+[e]

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-11210&oldid=88555"