Difference between revisions of "RXN-11213"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.13.79-RXN 1.14.13.79-RXN] == * direction: ** left-to-right * common-name: ** ent-kaurenoate mo...")
(Created page with "Category:reaction == Reaction RXN-11213 == * direction: ** left-to-right * common-name: ** methylmalonate-semialdehyde dehydrogenase * ec-number: ** [http://enzyme.expasy....")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.13.79-RXN 1.14.13.79-RXN] ==
+
== Reaction RXN-11213 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** ent-kaurenoate monooxygenase
+
** methylmalonate-semialdehyde dehydrogenase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/1.2.1.27 ec-1.2.1.27]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD1F-132]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD1F-136]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[CH3-MALONATE-S-ALD]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[HCO3]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROPIONYL-COA]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ05072]]
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* Gene: [[SJ00780]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ17249]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5047]], gibberellin biosynthesis IV (Gibberella fujikuroi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5047 PWY-5047]
+
* [[VALDEG-PWY]], L-valine degradation I:
−
** '''6''' reactions found over '''15''' reactions in the full pathway
+
** '''6''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-5034]], GA12 biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5034 PWY-5034]
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR116785
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19242 19242]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R06294 R06294]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00935 R00935]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=ent-kaurenoate monooxygenase}}
+
{{#set: common-name=methylmalonate-semialdehyde dehydrogenase}}
−
{{#set: nb gene associated=1}}
+
{{#set: ec-number=ec-1.2.1.27}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb gene associated=2}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:22, 18 March 2021

Reaction RXN-11213

  • direction:
    • left-to-right
  • common-name:
    • methylmalonate-semialdehyde dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • VALDEG-PWY, L-valine degradation I:
    • 6 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR116785
  • LIGAND-RXN:





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