Difference between revisions of "RXN-11213"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11837 RXN-11837] == * direction: ** left-to-right * common-name: ** 23s rrna pseudouridine1911/...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.13.79-RXN 1.14.13.79-RXN] == * direction: ** left-to-right * common-name: ** ent-kaurenoate mo...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11837 RXN-11837] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.13.79-RXN 1.14.13.79-RXN] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** 23s rrna pseudouridine1911/1915/1917 synthase
+
** ent-kaurenoate monooxygenase
* ec-number:
 
** [http://enzyme.expasy.org/EC/5.4.99.23 ec-5.4.99.23]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[23S-rRNA-uridine1911-1915-1917]][c] '''=>''' 1 [[23S-rRNA-pseudouridine1911-1915-1917]][c]
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* 1 [[CPD1F-132]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD1F-136]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ04758]]
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* Gene: [[SJ05072]]
** Category: [[annotation]]
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** Category: [[orthology]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ22218]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ19688]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5047]], gibberellin biosynthesis IV (Gibberella fujikuroi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5047 PWY-5047]
 +
** '''6''' reactions found over '''15''' reactions in the full pathway
 +
* [[PWY-5034]], GA12 biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5034 PWY-5034]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=42525 42525]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19242 19242]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R06294 R06294]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=23s rrna pseudouridine1911/1915/1917 synthase}}
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{{#set: common-name=ent-kaurenoate monooxygenase}}
{{#set: ec-number=ec-5.4.99.23}}
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{{#set: nb gene associated=1}}
{{#set: nb gene associated=3}}
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{{#set: nb pathway associated=2}}
{{#set: nb pathway associated=0}}
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{{#set: reconstruction category=orthology}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}

Revision as of 09:32, 27 August 2019

Reaction 1.14.13.79-RXN

  • direction:
    • left-to-right
  • common-name:
    • ent-kaurenoate monooxygenase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5047, gibberellin biosynthesis IV (Gibberella fujikuroi): PWY-5047
    • 6 reactions found over 15 reactions in the full pathway
  • PWY-5034, GA12 biosynthesis: PWY-5034
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links