Difference between revisions of "RXN-113"

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(Created page with "Category:reaction == Reaction THREONINE-ALDOLASE-RXN == * direction: ** left-to-right * common-name: ** threonine aldolase * ec-number: ** [http://enzyme.expasy.org/EC/4.1...")
(Created page with "Category:reaction == Reaction RXN-13327 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1.260 ec-2.1.1.260] == Reaction formula == * 1 ...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction THREONINE-ALDOLASE-RXN ==
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== Reaction RXN-13327 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** threonine aldolase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.2.48 ec-4.1.2.48]
+
** [http://enzyme.expasy.org/EC/2.1.1.260 ec-2.1.1.260]
−
** [http://enzyme.expasy.org/EC/4.1.2.5 ec-4.1.2.5]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[THR]][c] '''=>''' 1 [[ACETALD]][c] '''+''' 1 [[GLY]][c]
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* 1 [[18S-rRNA-pseudouridine-1191]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[18S-rRNA-N1-methylpseudouridine-1191]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ12304]]
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* Gene: [[SJ19583]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ06446]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5436]], L-threonine degradation IV:
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[GLYSYN-THR-PWY]], glycine biosynthesis IV:
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19626 19626]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=46717 46717]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00751 R00751]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=threonine aldolase}}
+
{{#set: ec-number=ec-2.1.1.260}}
−
{{#set: ec-number=ec-4.1.2.48|ec-4.1.2.5}}
+
{{#set: nb gene associated=1}}
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{{#set: nb gene associated=2}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb pathway associated=2}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 13:13, 14 January 2021

Reaction RXN-13327

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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