Difference between revisions of "RXN-11356"

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(Created page with "Category:reaction == Reaction SPHINGANINE-1-PHOSPHATE-ALDOLASE-RXN == * direction: ** left-to-right * common-name: ** dihydrosphingosine phosphate lyase * ec-number: ** [h...")
(Created page with "Category:reaction == Reaction KETOGLUTREDUCT-RXN == * direction: ** reversible * common-name: ** 2-oxoglutarate reductase ((r)-2-hydroxyglutarate-forming) * ec-number: **...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction SPHINGANINE-1-PHOSPHATE-ALDOLASE-RXN ==
+
== Reaction KETOGLUTREDUCT-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** dihydrosphingosine phosphate lyase
+
** 2-oxoglutarate reductase ((r)-2-hydroxyglutarate-forming)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.2.27 ec-4.1.2.27]
+
** [http://enzyme.expasy.org/EC/1.1.1.399 ec-1.1.1.399]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-649]][c] '''=>''' 1 [[PALMITALDEHYDE]][c] '''+''' 1 [[PHOSPHORYL-ETHANOLAMINE]][c]
+
* 1 [[NAD]][c] '''+''' 1 [[R-2-HYDROXYGLUTARATE]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ19063]]
+
* Gene: [[SJ09109]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ13526]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ02143]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ13642]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7119]], ceramide and sphingolipid recycling and degradation (yeast):
+
* [[P162-PWY]], L-glutamate degradation V (via hydroxyglutarate):
−
** '''4''' reactions found over '''16''' reactions in the full pathway
+
** '''7''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R11337 R11337]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18594 18594]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=49615 49615]
−
* LIGAND-RXN:
+
{{#set: direction=reversible}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02464 R02464]
+
{{#set: common-name=2-oxoglutarate reductase ((r)-2-hydroxyglutarate-forming)}}
−
{{#set: direction=left-to-right}}
+
{{#set: ec-number=ec-1.1.1.399}}
−
{{#set: common-name=dihydrosphingosine phosphate lyase}}
+
{{#set: nb gene associated=4}}
−
{{#set: ec-number=ec-4.1.2.27}}
 
−
{{#set: nb gene associated=1}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 19:03, 14 January 2021

Reaction KETOGLUTREDUCT-RXN

  • direction:
    • reversible
  • common-name:
    • 2-oxoglutarate reductase ((r)-2-hydroxyglutarate-forming)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • P162-PWY, L-glutamate degradation V (via hydroxyglutarate):
    • 7 reactions found over 11 reactions in the full pathway

Reconstruction information

External links





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