Difference between revisions of "RXN-11356"

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(Created page with "Category:reaction == Reaction RXN-12613 == * direction: ** left-to-right * common-name: ** thiaminase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.99.2 ec-3.5.99.2] ==...")
(Created page with "Category:reaction == Reaction KETOGLUTREDUCT-RXN == * direction: ** reversible * common-name: ** 2-oxoglutarate reductase ((r)-2-hydroxyglutarate-forming) * ec-number: **...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-12613 ==
+
== Reaction KETOGLUTREDUCT-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** thiaminase
+
** 2-oxoglutarate reductase ((r)-2-hydroxyglutarate-forming)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.5.99.2 ec-3.5.99.2]
+
** [http://enzyme.expasy.org/EC/1.1.1.399 ec-1.1.1.399]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-13578]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[HMP]][c]
+
* 1 [[NAD]][c] '''+''' 1 [[R-2-HYDROXYGLUTARATE]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ02191]]
+
* Gene: [[SJ09109]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ13526]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ02143]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ13642]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6899]], base-degraded thiamine salvage:
+
* [[P162-PWY]], L-glutamate degradation V (via hydroxyglutarate):
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''7''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R09993 R09993]
+
** [http://www.genome.jp/dbget-bin/www_bget?R11337 R11337]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31802 31802]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=49615 49615]
−
{{#set: direction=left-to-right}}
+
{{#set: direction=reversible}}
−
{{#set: common-name=thiaminase}}
+
{{#set: common-name=2-oxoglutarate reductase ((r)-2-hydroxyglutarate-forming)}}
−
{{#set: ec-number=ec-3.5.99.2}}
+
{{#set: ec-number=ec-1.1.1.399}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=4}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}

Revision as of 15:04, 5 January 2021

Reaction KETOGLUTREDUCT-RXN

  • direction:
    • reversible
  • common-name:
    • 2-oxoglutarate reductase ((r)-2-hydroxyglutarate-forming)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • P162-PWY, L-glutamate degradation V (via hydroxyglutarate):
    • 7 reactions found over 11 reactions in the full pathway

Reconstruction information

External links





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