Difference between revisions of "RXN-11373"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=D-XYLOSE-1-DEHYDROGENASE-NADP+-RXN D-XYLOSE-1-DEHYDROGENASE-NADP+-RXN] == * direction: ** reversibl...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN] == * direction: ** lef...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=D-XYLOSE-1-DEHYDROGENASE-NADP+-RXN D-XYLOSE-1-DEHYDROGENASE-NADP+-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN] ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** d-xylose dehydrogenase
+
** adenosylhomocysteine nucleosidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.179 ec-1.1.1.179]
+
** [http://enzyme.expasy.org/EC/3.2.2.9 ec-3.2.2.9]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[D-Xylopyranose]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[CPD-360]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADENINE]][c] '''+''' 1 [[CPD-564]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ14637]]
+
* Gene: [[SJ02916]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ12259]]
+
* Gene: [[SJ14933]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ07466]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6760]], D-xylose degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6760 PWY-6760]
+
* [[PWY-6153]], autoinducer AI-2 biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6153 PWY-6153]
 
** '''1''' reactions found over '''5''' reactions in the full pathway
 
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6154]], autoinducer AI-2 biosynthesis II (Vibrio): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6154 PWY-6154]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6151]], S-adenosyl-L-methionine cycle I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6151 PWY-6151]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-I9]], L-cysteine biosynthesis VI (from L-methionine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-I9 PWY-I9]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22000 22000]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17806 17806]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01430 R01430]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00194 R00194]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P49378 P49378]
+
** [http://www.uniprot.org/uniprot/Q9JV64 Q9JV64]
−
** [http://www.uniprot.org/uniprot/P31867 P31867]
+
** [http://www.uniprot.org/uniprot/Q9PJ10 Q9PJ10]
−
{{#set: direction=reversible}}
+
{{#set: direction=left-to-right}}
−
{{#set: common-name=d-xylose dehydrogenase}}
+
{{#set: common-name=adenosylhomocysteine nucleosidase}}
−
{{#set: ec-number=ec-1.1.1.179}}
+
{{#set: ec-number=ec-3.2.2.9}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=4}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 09:31, 27 August 2019

Reaction ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • adenosylhomocysteine nucleosidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6153, autoinducer AI-2 biosynthesis I: PWY-6153
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6154, autoinducer AI-2 biosynthesis II (Vibrio): PWY-6154
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-6151, S-adenosyl-L-methionine cycle I: PWY-6151
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-I9, L-cysteine biosynthesis VI (from L-methionine): PWY-I9
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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