Difference between revisions of "RXN-11476"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DLACTDEHYDROGNAD-RXN DLACTDEHYDROGNAD-RXN] == * direction: ** left-to-right * common-name: ** d-lac...")
 
(Created page with "Category:reaction == Reaction RXN-11476 == * direction: ** left-to-right * common-name: ** 3-oxo-glutaryl-[acp] methyl ester reductase ** 3-oxoacyl-[acyl-carrier-protein]...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DLACTDEHYDROGNAD-RXN DLACTDEHYDROGNAD-RXN] ==
+
== Reaction RXN-11476 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** d-lactate dehydrogenase
+
** 3-oxo-glutaryl-[acp] methyl ester reductase
 +
** 3-oxoacyl-[acyl-carrier-protein] reductase (nadph)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.28 ec-1.1.1.28]
+
** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PYRUVATE]][c] '''=>''' 1 [[D-LACTATE]][c] '''+''' 1 [[NAD]][c]
+
* 1 [[3-Ketoglutaryl-ACP-methyl-ester]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-Hydroxyglutaryl-ACP-methyl-ester]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ21294]]
+
* Gene: [[SJ13014]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ17743]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ20245]]
+
* Gene: [[SJ04229]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
+
* [[PWY-6519]], 8-amino-7-oxononanoate biosynthesis I:
−
** '''16''' reactions found over '''18''' reactions in the full pathway
+
** '''9''' reactions found over '''11''' reactions in the full pathway
−
* [[FERMENTATION-PWY]], mixed acid fermentation: [http://metacyc.org/META/NEW-IMAGE?object=FERMENTATION-PWY FERMENTATION-PWY]
 
−
** '''11''' reactions found over '''16''' reactions in the full pathway
 
−
* [[PWY4LZ-257]], superpathway of fermentation (Chlamydomonas reinhardtii): [http://metacyc.org/META/NEW-IMAGE?object=PWY4LZ-257 PWY4LZ-257]
 
−
** '''7''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6454]], vancomycin resistance I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6454 PWY-6454]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6901]], superpathway of glucose and xylose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6901 PWY-6901]
 
−
** '''10''' reactions found over '''8''' reactions in the full pathway
 
−
* [[ALACAT2-PWY]], L-alanine degradation II (to D-lactate): [http://metacyc.org/META/NEW-IMAGE?object=ALACAT2-PWY ALACAT2-PWY]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16371 16371]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00704 R00704]
+
** [http://www.genome.jp/dbget-bin/www_bget?R10116 R10116]
−
* UNIPROT:
+
* METANETX-RXN : MNXR113491
−
** [http://www.uniprot.org/uniprot/P26297 P26297]
 
−
** [http://www.uniprot.org/uniprot/P26298 P26298]
 
−
** [http://www.uniprot.org/uniprot/Q7M4J0 Q7M4J0]
 
−
** [http://www.uniprot.org/uniprot/Q9R553 Q9R553]
 
−
** [http://www.uniprot.org/uniprot/P06149 P06149]
 
−
** [http://www.uniprot.org/uniprot/Q9JT76 Q9JT76]
 
−
** [http://www.uniprot.org/uniprot/Q9JUP8 Q9JUP8]
 
−
** [http://www.uniprot.org/uniprot/P52643 P52643]
 
−
** [http://www.uniprot.org/uniprot/P45295 P45295]
 
−
** [http://www.uniprot.org/uniprot/P30901 P30901]
 
−
** [http://www.uniprot.org/uniprot/Q89388 Q89388]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=d-lactate dehydrogenase}}
+
{{#set: common-name=3-oxo-glutaryl-[acp] methyl ester reductase|3-oxoacyl-[acyl-carrier-protein] reductase (nadph)}}
−
{{#set: ec-number=ec-1.1.1.28}}
+
{{#set: ec-number=ec-1.1.1.100}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction RXN-11476

  • direction:
    • left-to-right
  • common-name:
    • 3-oxo-glutaryl-[acp] methyl ester reductase
    • 3-oxoacyl-[acyl-carrier-protein] reductase (nadph)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6519, 8-amino-7-oxononanoate biosynthesis I:
    • 9 reactions found over 11 reactions in the full pathway

Reconstruction information

External links

  • LIGAND-RXN:
  • METANETX-RXN : MNXR113491
  • Property "Common-name" (as page type) with input value "3-oxo-glutaryl-[acp] methyl ester reductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Common-name" (as page type) with input value "3-oxoacyl-[acyl-carrier-protein] reductase (nadph)" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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