Difference between revisions of "RXN-11476"

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(Created page with "Category:reaction == Reaction GTPPYPHOSKIN-RXN == * direction: ** left-to-right * common-name: ** gtp pyrophosphokinase ** gtp diphosphokinase * ec-number: ** [http://enzy...")
(Created page with "Category:reaction == Reaction RXN-11476 == * direction: ** left-to-right * common-name: ** 3-oxo-glutaryl-[acp] methyl ester reductase ** 3-oxoacyl-[acyl-carrier-protein]...")
 
(One intermediate revision by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GTPPYPHOSKIN-RXN ==
+
== Reaction RXN-11476 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** gtp pyrophosphokinase
+
** 3-oxo-glutaryl-[acp] methyl ester reductase
−
** gtp diphosphokinase
+
** 3-oxoacyl-[acyl-carrier-protein] reductase (nadph)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.6.5 ec-2.7.6.5]
+
** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[GTP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[GDP-TP]][c]
+
* 1 [[3-Ketoglutaryl-ACP-methyl-ester]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-Hydroxyglutaryl-ACP-methyl-ester]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ10100]]
+
* Gene: [[SJ13014]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ07200]]
+
* Gene: [[SJ17743]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ13961]]
+
* Gene: [[SJ04229]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ14690]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PPGPPMET-PWY]], ppGpp metabolism:
+
* [[PWY-6519]], 8-amino-7-oxononanoate biosynthesis I:
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''9''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22089 22089]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00429 R00429]
+
** [http://www.genome.jp/dbget-bin/www_bget?R10116 R10116]
−
* UNIPROT:
+
* METANETX-RXN : MNXR113491
−
** [http://www.uniprot.org/uniprot/Q9CJ94 Q9CJ94]
 
−
** [http://www.uniprot.org/uniprot/P44644 P44644]
 
−
** [http://www.uniprot.org/uniprot/Q9PDR3 Q9PDR3]
 
−
** [http://www.uniprot.org/uniprot/P0AG20 P0AG20]
 
−
** [http://www.uniprot.org/uniprot/P52560 P52560]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=gtp pyrophosphokinase|gtp diphosphokinase}}
+
{{#set: common-name=3-oxo-glutaryl-[acp] methyl ester reductase|3-oxoacyl-[acyl-carrier-protein] reductase (nadph)}}
−
{{#set: ec-number=ec-2.7.6.5}}
+
{{#set: ec-number=ec-1.1.1.100}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb gene associated=3}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction RXN-11476

  • direction:
    • left-to-right
  • common-name:
    • 3-oxo-glutaryl-[acp] methyl ester reductase
    • 3-oxoacyl-[acyl-carrier-protein] reductase (nadph)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6519, 8-amino-7-oxononanoate biosynthesis I:
    • 9 reactions found over 11 reactions in the full pathway

Reconstruction information

External links

  • LIGAND-RXN:
  • METANETX-RXN : MNXR113491
  • Property "Common-name" (as page type) with input value "3-oxo-glutaryl-[acp] methyl ester reductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Common-name" (as page type) with input value "3-oxoacyl-[acyl-carrier-protein] reductase (nadph)" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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