Difference between revisions of "RXN-11486"

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(Created page with "Category:reaction == Reaction GUANINE-DEAMINASE-RXN == * direction: ** left-to-right * common-name: ** guanine deaminase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.4...")
(Created page with "Category:reaction == Reaction NITRITE-REDUCTASE-CYTOCHROME-RXN == * direction: ** left-to-right * common-name: ** nitrite reductase (no-forming) * ec-number: ** [http://en...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GUANINE-DEAMINASE-RXN ==
+
== Reaction NITRITE-REDUCTASE-CYTOCHROME-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** guanine deaminase
+
** nitrite reductase (no-forming)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.5.4.3 ec-3.5.4.3]
+
** [http://enzyme.expasy.org/EC/1.7.2.1 ec-1.7.2.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GUANINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[XANTHINE]][c]
+
* 1 [[Cytochromes-C-Reduced]][c] '''+''' 1 [[NITRITE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[Cytochromes-C-Oxidized]][c] '''+''' 1 [[NITRIC-OXIDE]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ08613]]
+
* Gene: [[SJ15937]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5497]], purine nucleobases degradation II (anaerobic):
+
* [[P303-PWY]], ammonia oxidation II (anaerobic):
−
** '''10''' reactions found over '''24''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[P164-PWY]], purine nucleobases degradation I (anaerobic):
+
* [[PWY-6748]], nitrate reduction VII (denitrification):
−
** '''6''' reactions found over '''17''' reactions in the full pathway
+
** '''1''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6606]], guanosine nucleotides degradation II:
+
* [[PWY-6523]], nitrite-dependent anaerobic methane oxidation:
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6608]], guanosine nucleotides degradation III:
+
* [[PWY-7084]], nitrifier denitrification:
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14666 14666]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01676 R01676]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00783 R00783]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q06006 Q06006]
 +
** [http://www.uniprot.org/uniprot/Q52519 Q52519]
 +
** [http://www.uniprot.org/uniprot/P24474 P24474]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=guanine deaminase}}
+
{{#set: common-name=nitrite reductase (no-forming)}}
−
{{#set: ec-number=ec-3.5.4.3}}
+
{{#set: ec-number=ec-1.7.2.1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=4}}
 
{{#set: nb pathway associated=4}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 11:20, 15 January 2021

Reaction NITRITE-REDUCTASE-CYTOCHROME-RXN

  • direction:
    • left-to-right
  • common-name:
    • nitrite reductase (no-forming)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • P303-PWY, ammonia oxidation II (anaerobic):
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6748, nitrate reduction VII (denitrification):
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6523, nitrite-dependent anaerobic methane oxidation:
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7084, nitrifier denitrification:
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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