Difference between revisions of "RXN-11501"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATE-SYNTHASE-NADH-RXN GLUTAMATE-SYNTHASE-NADH-RXN] == * direction: ** left-to-right * common-...")
(Created page with "Category:reaction == Reaction RXN-11501 == * direction: ** left-to-right * common-name: ** alpha-galactosidase * ec-number: ** [http://enzyme.expasy.org/EC/3.2.1.22 ec-3.2...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATE-SYNTHASE-NADH-RXN GLUTAMATE-SYNTHASE-NADH-RXN] ==
+
== Reaction RXN-11501 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** glutamate synthase
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** alpha-galactosidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.4.1.14 ec-1.4.1.14]
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** [http://enzyme.expasy.org/EC/3.2.1.22 ec-3.2.1.22]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 2 [[GLT]][c] '''+''' 1 [[NAD]][c]
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* 1 [[CPD-170]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ALPHA-D-GALACTOSE]][c] '''+''' 1 [[CPD-1099]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ10812]]
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* Gene: [[SJ02145]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ10813]]
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* Gene: [[SJ02144]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ20190]]
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* Gene: [[SJ05258]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ04922]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6963]], ammonia assimilation cycle I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6963 PWY-6963]
+
* [[PWY-6527]], stachyose degradation:
−
** '''4''' reactions found over '''2''' reactions in the full pathway
+
** '''7''' reactions found over '''7''' reactions in the full pathway
−
* [[GLUGLNSYN-PWY]], L-glutamate biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=GLUGLNSYN-PWY GLUGLNSYN-PWY]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR100010
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13755 13755]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00093 R00093]
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** [http://www.genome.jp/dbget-bin/www_bget?R03634 R03634]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9RXX2 Q9RXX2]
 
−
** [http://www.uniprot.org/uniprot/Q03460 Q03460]
 
−
** [http://www.uniprot.org/uniprot/Q22275 Q22275]
 
−
** [http://www.uniprot.org/uniprot/O61143 O61143]
 
−
** [http://www.uniprot.org/uniprot/Q9C102 Q9C102]
 
−
** [http://www.uniprot.org/uniprot/Q9P540 Q9P540]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=glutamate synthase}}
+
{{#set: common-name=alpha-galactosidase}}
−
{{#set: ec-number=ec-1.4.1.14}}
+
{{#set: ec-number=ec-3.2.1.22}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_arabidopsis_thaliana}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction RXN-11501

  • direction:
    • left-to-right
  • common-name:
    • alpha-galactosidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6527, stachyose degradation:
    • 7 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR100010
  • LIGAND-RXN:





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