Difference between revisions of "RXN-11555"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=SUCSYN-PWY SUCSYN-PWY] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-1117 ta...")
(Created page with "Category:reaction == Reaction RXN-11555 == * direction: ** left-to-right * common-name: ** dermatan 4-sulfotransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.8.2.3...")
 
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[[Category:pathway]]
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[[Category:reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=SUCSYN-PWY SUCSYN-PWY] ==
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== Reaction RXN-11555 ==
* taxonomic-range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=tax-1117 tax-1117]
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** left-to-right
** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-33090]
 
 
* common-name:
 
* common-name:
** sucrose biosynthesis i (from photosynthesis)
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** dermatan 4-sulfotransferase
== Reaction(s) found ==
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* ec-number:
* [[F16ALDOLASE-RXN]]
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** [http://enzyme.expasy.org/EC/2.8.2.35 ec-2.8.2.35]
* [[F16BDEPHOS-RXN]]
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== Reaction formula ==
* [[GAPOXNPHOSPHN-RXN]]
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* 1 [[Dermatan-NacGal]][c] '''+''' 1 [[PAPS]][c] '''=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[Dermatan-NAcGal-4-sulfates]][c] '''+''' 1 [[PROTON]][c]
* [[PGLUCISOM-RXN]]
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== Gene(s) associated with this reaction  ==
* [[PHOSGLYPHOS-RXN]]
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* Gene: [[SJ11262]]
== Reaction(s) not found ==
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** Category: [[annotation]]
* [http://metacyc.org/META/NEW-IMAGE?object=SUCROSE-PHOSPHATASE-RXN SUCROSE-PHOSPHATASE-RXN]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* [http://metacyc.org/META/NEW-IMAGE?object=SUCROSE-PHOSPHATE-SYNTHASE-RXN SUCROSE-PHOSPHATE-SYNTHASE-RXN]
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== Pathway(s) ==
{{#set: taxonomic-range=tax-1117|tax-33090}}
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* [[PWY-6568]], dermatan sulfate biosynthesis (late stages):
{{#set: common-name=sucrose biosynthesis i (from photosynthesis)}}
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** '''2''' reactions found over '''4''' reactions in the full pathway
{{#set: nb reaction found=5}}
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== Reconstruction information  ==
{{#set: completion rate=0.71}}
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
{{#set: nb total reaction=7}}
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== External links  ==
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* METANETX-RXN : MNXR117008
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=48053 48053]
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{{#set: direction=left-to-right}}
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{{#set: common-name=dermatan 4-sulfotransferase}}
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{{#set: ec-number=ec-2.8.2.35}}
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{{#set: nb gene associated=1}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:24, 18 March 2021

Reaction RXN-11555

  • direction:
    • left-to-right
  • common-name:
    • dermatan 4-sulfotransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6568, dermatan sulfate biosynthesis (late stages):
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR117008
  • RHEA: