Difference between revisions of "RXN-11602"

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(Created page with "Category:reaction == Reaction 4.2.1.107-RXN == * direction: ** reversible * common-name: ** (24e)-3α,7α,12α-trihydroxy-5β-cholest-24-enoyl-coa hydra...")
(Created page with "Category:reaction == Reaction RXN-11602 == * direction: ** left-to-right * common-name: ** 23s rrna m5c1962 methyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/...")
 
(2 intermediate revisions by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction 4.2.1.107-RXN ==
+
== Reaction RXN-11602 ==
 
* direction:
 
* direction:
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
** (24e)-3α,7α,12α-trihydroxy-5β-cholest-24-enoyl-coa hydratase
+
** 23s rrna m5c1962 methyltransferase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/4.2.1.107 ec-4.2.1.107]
+
** [http://enzyme.expasy.org/EC/2.1.1.191 ec-2.1.1.191]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-7275]][c] '''<=>''' 1 [[CPD-7243]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[23S-rRNA-cytosine-1962]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[23S-rRNA-5-methylcytosine1962]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ03584]]
+
* Gene: [[SJ08528]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6061]], bile acid biosynthesis, neutral pathway:
 
** '''3''' reactions found over '''29''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
+
* METANETX-RXN : MNXR117042
** [http://www.genome.jp/dbget-bin/www_bget?R04813 R04813]
+
* RHEA:
{{#set: direction=reversible}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=42913 42913]
{{#set: common-name=(24e)-3&alpha;,7&alpha;,12&alpha;-trihydroxy-5&beta;-cholest-24-enoyl-coa hydratase}}
+
{{#set: direction=left-to-right}}
{{#set: ec-number=ec-4.2.1.107}}
+
{{#set: common-name=23s rrna m5c1962 methyltransferase}}
 +
{{#set: ec-number=ec-2.1.1.191}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-11602

  • direction:
    • left-to-right
  • common-name:
    • 23s rrna m5c1962 methyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR117042
  • RHEA: