Difference between revisions of "RXN-11623"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-2043 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.2.1.4 ec-3.2.1.4] == Reaction formula == * 1 CELLU...")
(Created page with "Category:reaction == Reaction RXN-18332 == * direction: ** reversible * common-name: ** udp-l-rhamnose synthase * ec-number: ** [http://enzyme.expasy.org/EC/5.1.3 ec-5.1.3...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-2043 ==
+
== Reaction RXN-18332 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 +
* common-name:
 +
** udp-l-rhamnose synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.2.1.4 ec-3.2.1.4]
+
** [http://enzyme.expasy.org/EC/5.1.3 ec-5.1.3]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CELLULOSE]][c] '''+''' 1 [[WATER]][c] '''=>''' 2 [[Cellodextrins]][c]
+
* 1 [[CPD-663]][c] '''<=>''' 1 [[CPD-11540]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ18318]]
+
* Gene: [[SJ16241]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ10915]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ05782]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6788]], cellulose degradation II (fungi):
+
* [[PWY-3261]], UDP-&beta;-L-rhamnose biosynthesis:
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
{{#set: direction=reversible}}
−
* UNIPROT:
+
{{#set: common-name=udp-l-rhamnose synthase}}
−
** [http://www.uniprot.org/uniprot/O64949 O64949]
+
{{#set: ec-number=ec-5.1.3}}
−
** [http://www.uniprot.org/uniprot/O64402 O64402]
+
{{#set: nb gene associated=1}}
−
** [http://www.uniprot.org/uniprot/O59943 O59943]
 
−
** [http://www.uniprot.org/uniprot/P22503 P22503]
 
−
** [http://www.uniprot.org/uniprot/O50014 O50014]
 
−
** [http://www.uniprot.org/uniprot/O50013 O50013]
 
−
** [http://www.uniprot.org/uniprot/O50012 O50012]
 
−
** [http://www.uniprot.org/uniprot/O50011 O50011]
 
−
** [http://www.uniprot.org/uniprot/O64401 O64401]
 
−
** [http://www.uniprot.org/uniprot/O23954 O23954]
 
−
** [http://www.uniprot.org/uniprot/O22298 O22298]
 
−
** [http://www.uniprot.org/uniprot/O22297 O22297]
 
−
** [http://www.uniprot.org/uniprot/O04890 O04890]
 
−
** [http://www.uniprot.org/uniprot/Q39848 Q39848]
 
−
** [http://www.uniprot.org/uniprot/Q39847 Q39847]
 
−
** [http://www.uniprot.org/uniprot/O04972 O04972]
 
−
** [http://www.uniprot.org/uniprot/Q41012 Q41012]
 
−
** [http://www.uniprot.org/uniprot/Q39826 Q39826]
 
−
** [http://www.uniprot.org/uniprot/Q42872 Q42872]
 
−
** [http://www.uniprot.org/uniprot/Q42871 Q42871]
 
−
** [http://www.uniprot.org/uniprot/Q9SVJ2 Q9SVJ2]
 
−
** [http://www.uniprot.org/uniprot/Q9SVJ3 Q9SVJ3]
 
−
** [http://www.uniprot.org/uniprot/Q9SVJ4 Q9SVJ4]
 
−
** [http://www.uniprot.org/uniprot/Q9SUS0 Q9SUS0]
 
−
** [http://www.uniprot.org/uniprot/Q9SZ90 Q9SZ90]
 
−
** [http://www.uniprot.org/uniprot/O64890 O64890]
 
−
** [http://www.uniprot.org/uniprot/O64889 O64889]
 
−
** [http://www.uniprot.org/uniprot/O82513 O82513]
 
−
** [http://www.uniprot.org/uniprot/O80497 O80497]
 
−
** [http://www.uniprot.org/uniprot/O64891 O64891]
 
−
** [http://www.uniprot.org/uniprot/O81416 O81416]
 
−
** [http://www.uniprot.org/uniprot/O48766 O48766]
 
−
** [http://www.uniprot.org/uniprot/Q55365 Q55365]
 
−
** [http://www.uniprot.org/uniprot/Q38890 Q38890]
 
−
** [http://www.uniprot.org/uniprot/Q12665 Q12665]
 
−
** [http://www.uniprot.org/uniprot/Q43751 Q43751]
 
−
** [http://www.uniprot.org/uniprot/Q9SML6 Q9SML6]
 
−
** [http://www.uniprot.org/uniprot/Q43750 Q43750]
 
−
** [http://www.uniprot.org/uniprot/Q38817 Q38817]
 
−
** [http://www.uniprot.org/uniprot/P43317 P43317]
 
−
** [http://www.uniprot.org/uniprot/Q42875 Q42875]
 
−
** [http://www.uniprot.org/uniprot/Q42660 Q42660]
 
−
** [http://www.uniprot.org/uniprot/Q59665 Q59665]
 
−
** [http://www.uniprot.org/uniprot/Q59395 Q59395]
 
−
** [http://www.uniprot.org/uniprot/Q43149 Q43149]
 
−
** [http://www.uniprot.org/uniprot/Q12624 Q12624]
 
−
** [http://www.uniprot.org/uniprot/P38534 P38534]
 
−
** [http://www.uniprot.org/uniprot/P23666 P23666]
 
−
** [http://www.uniprot.org/uniprot/P19424 P19424]
 
−
** [http://www.uniprot.org/uniprot/P07982 P07982]
 
−
** [http://www.uniprot.org/uniprot/Q05156 Q05156]
 
−
** [http://www.uniprot.org/uniprot/Q7M0M9 Q7M0M9]
 
−
** [http://www.uniprot.org/uniprot/Q9R5L7 Q9R5L7]
 
−
** [http://www.uniprot.org/uniprot/Q53302 Q53302]
 
−
** [http://www.uniprot.org/uniprot/P26224 P26224]
 
−
** [http://www.uniprot.org/uniprot/P21834 P21834]
 
−
** [http://www.uniprot.org/uniprot/P21833 P21833]
 
−
** [http://www.uniprot.org/uniprot/P22669 P22669]
 
−
** [http://www.uniprot.org/uniprot/P05522 P05522]
 
−
** [http://www.uniprot.org/uniprot/P07103 P07103]
 
−
** [http://www.uniprot.org/uniprot/P10474 P10474]
 
−
** [http://www.uniprot.org/uniprot/Q46002 Q46002]
 
−
** [http://www.uniprot.org/uniprot/P16630 P16630]
 
−
** [http://www.uniprot.org/uniprot/Q59241 Q59241]
 
−
** [http://www.uniprot.org/uniprot/P13933 P13933]
 
−
** [http://www.uniprot.org/uniprot/P07985 P07985]
 
−
** [http://www.uniprot.org/uniprot/P19570 P19570]
 
−
** [http://www.uniprot.org/uniprot/P20847 P20847]
 
−
** [http://www.uniprot.org/uniprot/P23549 P23549]
 
−
** [http://www.uniprot.org/uniprot/P23550 P23550]
 
−
** [http://www.uniprot.org/uniprot/P19487 P19487]
 
−
** [http://www.uniprot.org/uniprot/P16218 P16218]
 
−
** [http://www.uniprot.org/uniprot/P23340 P23340]
 
−
** [http://www.uniprot.org/uniprot/Q01409 Q01409]
 
−
** [http://www.uniprot.org/uniprot/O67401 O67401]
 
−
** [http://www.uniprot.org/uniprot/Q7M4T4 Q7M4T4]
 
−
** [http://www.uniprot.org/uniprot/P28622 P28622]
 
−
** [http://www.uniprot.org/uniprot/P94622 P94622]
 
−
** [http://www.uniprot.org/uniprot/Q45554 Q45554]
 
−
** [http://www.uniprot.org/uniprot/Q59963 Q59963]
 
−
** [http://www.uniprot.org/uniprot/P54937 P54937]
 
−
** [http://www.uniprot.org/uniprot/Q03882 Q03882]
 
−
** [http://www.uniprot.org/uniprot/P10475 P10475]
 
−
** [http://www.uniprot.org/uniprot/P10477 P10477]
 
−
** [http://www.uniprot.org/uniprot/P04954 P04954]
 
−
** [http://www.uniprot.org/uniprot/P04956 P04956]
 
−
** [http://www.uniprot.org/uniprot/P04955 P04955]
 
−
** [http://www.uniprot.org/uniprot/Q01786 Q01786]
 
−
** [http://www.uniprot.org/uniprot/P26221 P26221]
 
−
** [http://www.uniprot.org/uniprot/P29719 P29719]
 
−
** [http://www.uniprot.org/uniprot/P06565 P06565]
 
−
** [http://www.uniprot.org/uniprot/Q59290 Q59290]
 
−
** [http://www.uniprot.org/uniprot/Q12714 Q12714]
 
−
** [http://www.uniprot.org/uniprot/P17877 P17877]
 
−
** [http://www.uniprot.org/uniprot/P29019 P29019]
 
−
** [http://www.uniprot.org/uniprot/P16216 P16216]
 
−
** [http://www.uniprot.org/uniprot/P17974 P17974]
 
−
** [http://www.uniprot.org/uniprot/P26222 P26222]
 
−
** [http://www.uniprot.org/uniprot/Q53324 Q53324]
 
−
** [http://www.uniprot.org/uniprot/Q05332 Q05332]
 
−
** [http://www.uniprot.org/uniprot/P23548 P23548]
 
−
** [http://www.uniprot.org/uniprot/P06564 P06564]
 
−
** [http://www.uniprot.org/uniprot/Q45532 Q45532]
 
−
** [http://www.uniprot.org/uniprot/P07983 P07983]
 
−
** [http://www.uniprot.org/uniprot/P07981 P07981]
 
−
** [http://www.uniprot.org/uniprot/P06566 P06566]
 
−
** [http://www.uniprot.org/uniprot/P07984 P07984]
 
−
</div>
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: ec-number=ec-3.2.1.4}}
 
−
{{#set: nb gene associated=3}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 11:21, 15 January 2021

Reaction RXN-18332

  • direction:
    • reversible
  • common-name:
    • udp-l-rhamnose synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-3261, UDP-β-L-rhamnose biosynthesis:
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-11623&oldid=114602"