Difference between revisions of "RXN-11682"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7758 PWY-7758] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-191412 tax-...")
(Created page with "Category:reaction == Reaction RXN-2425 == * direction: ** reversible * common-name: ** 2,3-dehydroadipyl-coa hydratase ** enoyl-coa hydratase * ec-number: ** [http://enzym...")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7758 PWY-7758] ==
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== Reaction RXN-2425 ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-191412 tax-191412]
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** reversible
 
* common-name:
 
* common-name:
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** bacteriochlorophyll d biosynthesis
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** 2,3-dehydroadipyl-coa hydratase
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== Reaction(s) found ==
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** enoyl-coa hydratase
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* [[RXN-5286]]
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* ec-number:
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== Reaction(s) not found ==
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** [http://enzyme.expasy.org/EC/4.2.1.17 ec-4.2.1.17]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17436 RXN-17436]
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== Reaction formula ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17432 RXN-17432]
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* 1 [[3-HYDROXYADIPYL-COA]][c] '''<=>''' 1 [[TRANS-23-DEHYDROADIPYL-COA]][c] '''+''' 1 [[WATER]][c]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17438 RXN-17438]
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== Gene(s) associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17433 RXN-17433]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17440 RXN-17440]
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* Gene: [[SJ21390]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17431 RXN-17431]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17435 RXN-17435]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17439 RXN-17439]
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** Category: [[orthology]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17429 RXN-17429]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17434 RXN-17434]
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* Gene: [[SJ10275]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17430 RXN-17430]
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** Category: [[orthology]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17437 RXN-17437]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17491 RXN-17491]
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* Gene: [[SJ03913]]
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{{#set: taxonomic-range=tax-191412}}
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** Category: [[annotation]]
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{{#set: common-name=bacteriochlorophyll d biosynthesis}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: nb reaction found=1}}
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** Category: [[orthology]]
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{{#set: completion rate=0.07}}
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: nb total reaction=14}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ14591]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ07211]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ03584]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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</div>
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== Pathway(s)  ==
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* [[PWY0-321]], phenylacetate degradation I (aerobic):
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** '''2''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-1361]], benzoyl-CoA degradation I (aerobic):
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** '''2''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34863 34863]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R06942 R06942]
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{{#set: direction=reversible}}
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{{#set: common-name=2,3-dehydroadipyl-coa hydratase|enoyl-coa hydratase}}
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{{#set: ec-number=ec-4.2.1.17}}
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{{#set: nb gene associated=6}}
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{{#set: nb pathway associated=2}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}

Revision as of 20:45, 18 December 2020

Reaction RXN-2425

  • direction:
    • reversible
  • common-name:
    • 2,3-dehydroadipyl-coa hydratase
    • enoyl-coa hydratase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY0-321, phenylacetate degradation I (aerobic):
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-1361, benzoyl-CoA degradation I (aerobic):
    • 2 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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