Difference between revisions of "RXN-11734"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-458 RXN3O-458] == * direction: ** left-to-right * common-name: ** phytosphingosine kinase * e...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5647 RXN-5647] == * direction: ** left-to-right * common-name: ** phosphocholine phosphatase *...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-458 RXN3O-458] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5647 RXN-5647] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** phytosphingosine kinase
+
** phosphocholine phosphatase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.7.1.91 ec-2.7.1.91]
+
** [http://enzyme.expasy.org/EC/3.1.3.75 ec-3.1.3.75]
* synonymous:
 
** phs kinase
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ATP]][c] '''+''' 1 [[PHYTOSPINGOSINE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PHTYOSPHINGOSINE-1-P]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[PHOSPHORYL-CHOLINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CHOLINE]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ16261]]
+
* Gene: [[SJ21090]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7119]], sphingolipid recycling and degradation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7119 PWY-7119]
+
* [[PWY-3385]], choline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3385 PWY-3385]
** '''4''' reactions found over '''11''' reactions in the full pathway
+
** '''2''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33564 33564]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10493 10493]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R06871 R06871]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=phytosphingosine kinase}}
+
{{#set: common-name=phosphocholine phosphatase}}
{{#set: ec-number=ec-2.7.1.91}}
+
{{#set: ec-number=ec-3.1.3.75}}
{{#set: synonymous=phs kinase}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}

Revision as of 09:30, 27 August 2019

Reaction RXN-5647

  • direction:
    • left-to-right
  • common-name:
    • phosphocholine phosphatase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-3385, choline biosynthesis I: PWY-3385
    • 2 reactions found over 6 reactions in the full pathway

Reconstruction information

External links