Difference between revisions of "RXN-11754"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCINATE--COA-LIGASE-GDP-FORMING-RXN SUCCINATE--COA-LIGASE-GDP-FORMING-RXN] == * direction: ** rev...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDP-GLUCOSE-46-DEHYDRATASE-RXN UDP-GLUCOSE-46-DEHYDRATASE-RXN] == * direction: ** left-to-right * c...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCINATE--COA-LIGASE-GDP-FORMING-RXN SUCCINATE--COA-LIGASE-GDP-FORMING-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDP-GLUCOSE-46-DEHYDRATASE-RXN UDP-GLUCOSE-46-DEHYDRATASE-RXN] ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** succinate-coa ligase
+
** udp-glucose 4,6-dehydratase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.2.1.4 ec-6.2.1.4]
+
** [http://enzyme.expasy.org/EC/4.2.1.76 ec-4.2.1.76]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CO-A]][c] '''+''' 1 [[GTP]][c] '''+''' 1 [[SUC]][c] '''<=>''' 1 [[GDP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[SUC-COA]][c]
+
* 1 [[CPD-12575]][c] '''=>''' 1 [[CPD-663]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03269]]
+
* Gene: [[SJ16241]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ21782]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY66-398]], TCA cycle III (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398]
+
* [[PWY-3261]], UDP-&beta;-L-rhamnose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3261 PWY-3261]
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22123 22123]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21501 21501]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00432 R00432]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00293 R00293]
−
* UNIPROT:
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/Q03184 Q03184]
+
{{#set: common-name=udp-glucose 4,6-dehydratase}}
−
** [http://www.uniprot.org/uniprot/O08371 O08371]
+
{{#set: ec-number=ec-4.2.1.76}}
−
** [http://www.uniprot.org/uniprot/O84829 O84829]
+
{{#set: nb gene associated=1}}
−
** [http://www.uniprot.org/uniprot/Q8LAD2 Q8LAD2]
 
−
** [http://www.uniprot.org/uniprot/P53587 P53587]
 
−
** [http://www.uniprot.org/uniprot/P53312 P53312]
 
−
** [http://www.uniprot.org/uniprot/P36967 P36967]
 
−
** [http://www.uniprot.org/uniprot/P13086 P13086]
 
−
** [http://www.uniprot.org/uniprot/Q9Y436 Q9Y436]
 
−
** [http://www.uniprot.org/uniprot/P68209 P68209]
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=succinate-coa ligase}}
 
−
{{#set: ec-number=ec-6.2.1.4}}
 
−
{{#set: nb gene associated=2}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 09:31, 27 August 2019

Reaction UDP-GLUCOSE-46-DEHYDRATASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • udp-glucose 4,6-dehydratase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-3261, UDP-β-L-rhamnose biosynthesis: PWY-3261
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-11754&oldid=36646"