Difference between revisions of "RXN-11754"

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(Created page with "Category:reaction == Reaction RXN1F-163 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.14.20 ec-1.14.20] == Reaction formula == * 1 2-KE...")
(Created page with "Category:reaction == Reaction ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN == * direction: ** reversible * common-name: ** serine--pyruvate aminotransferase * ec-number: ** [h...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN1F-163 ==
+
== Reaction ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 +
* common-name:
 +
** serine--pyruvate aminotransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.14.20 ec-1.14.20]
+
** [http://enzyme.expasy.org/EC/2.6.1.44 ec-2.6.1.44]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CPD1F-97]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD1F-120]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[GLYOX]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c] '''<=>''' 1 [[GLY]][c] '''+''' 1 [[PYRUVATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ09475]]
−
* Gene: [[SJ14677]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ14672]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ08018]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ07557]]
+
* Gene: [[SJ07216]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ14675]]
+
* Gene: [[SJ19809]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ14670]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5070]], gibberellin biosynthesis I (non C-3, non C-13 hydroxylation):
+
* [[GLYSYN-ALA-PWY]], glycine biosynthesis III:
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24248 24248]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R06323 R06323]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00369 R00369]
−
{{#set: direction=left-to-right}}
+
* UNIPROT:
−
{{#set: ec-number=ec-1.14.20}}
+
** [http://www.uniprot.org/uniprot/P31029 P31029]
−
{{#set: nb gene associated=6}}
+
** [http://www.uniprot.org/uniprot/P31030 P31030]
 +
** [http://www.uniprot.org/uniprot/P41689 P41689]
 +
** [http://www.uniprot.org/uniprot/Q94055 Q94055]
 +
** [http://www.uniprot.org/uniprot/Q56YA5 Q56YA5]
 +
** [http://www.uniprot.org/uniprot/P21549 P21549]
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=serine--pyruvate aminotransferase}}
 +
{{#set: ec-number=ec-2.6.1.44}}
 +
{{#set: nb gene associated=3}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:33, 5 January 2021

Reaction ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN

  • direction:
    • reversible
  • common-name:
    • serine--pyruvate aminotransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • GLYSYN-ALA-PWY, glycine biosynthesis III:
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





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