Difference between revisions of "RXN-11757"

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(Created page with "Category:reaction == Reaction HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN == * direction: ** reversible * common-name: ** hydroxymethyl glutaryl-coa synthase * ec-number: ** [h...")
(Created page with "Category:reaction == Reaction RXN-16151 == * direction: ** reversible * common-name: ** lysophospholipid ricinoloyltransferase * ec-number: ** [http://enzyme.expasy.org/EC...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN ==
+
== Reaction RXN-16151 ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
* common-name:
 
* common-name:
−
** hydroxymethyl glutaryl-coa synthase
+
** lysophospholipid ricinoloyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.3.10 ec-2.3.3.10]
+
** [http://enzyme.expasy.org/EC/2.3.1.23 ec-2.3.1.23]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ACETOACETYL-COA]][c] '''+''' 1 [[ACETYL-COA]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[3-HYDROXY-3-METHYL-GLUTARYL-COA]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CPD-15364]][c] '''+''' 1 [[Glycerolipids]][c] '''<=>''' 1 [[CO-A]][c] '''+''' 1 [[CPD-17396]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ11593]]
+
* Gene: [[SJ13643]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ09127]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ06617]]
+
* Gene: [[SJ22477]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-922]], mevalonate pathway I:
+
* [[PWY-7618]], ricinoleate biosynthesis:
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6174]], mevalonate pathway II (archaea):
+
* [[PWY-6433]], hydroxylated fatty acid biosynthesis (plants):
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''17''' reactions found over '''22''' reactions in the full pathway
−
* [[PWY66-367]], ketogenesis:
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7571]], ferrichrome A biosynthesis:
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7391]], isoprene biosynthesis II (engineered):
 
−
** '''7''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7524]], mevalonate pathway III (archaea):
 
−
** '''5''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10191 10191]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01978 R01978]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P13704 P13704]
 
−
** [http://www.uniprot.org/uniprot/P22791 P22791]
 
−
** [http://www.uniprot.org/uniprot/P54870 P54870]
 
−
** [http://www.uniprot.org/uniprot/P54869 P54869]
 
−
** [http://www.uniprot.org/uniprot/O51626 O51626]
 
−
** [http://www.uniprot.org/uniprot/Q9CFA9 Q9CFA9]
 
−
** [http://www.uniprot.org/uniprot/P17425 P17425]
 
−
** [http://www.uniprot.org/uniprot/Q7LZE7 Q7LZE7]
 
−
** [http://www.uniprot.org/uniprot/Q01581 Q01581]
 
−
** [http://www.uniprot.org/uniprot/P54961 P54961]
 
−
** [http://www.uniprot.org/uniprot/P54839 P54839]
 
−
** [http://www.uniprot.org/uniprot/P54874 P54874]
 
−
** [http://www.uniprot.org/uniprot/P54868 P54868]
 
−
** [http://www.uniprot.org/uniprot/P54873 P54873]
 
−
** [http://www.uniprot.org/uniprot/P93773 P93773]
 
−
</div>
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: common-name=hydroxymethyl glutaryl-coa synthase}}
+
{{#set: common-name=lysophospholipid ricinoloyltransferase}}
−
{{#set: ec-number=ec-2.3.3.10}}
+
{{#set: ec-number=ec-2.3.1.23}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:36, 5 January 2021

Reaction RXN-16151

  • direction:
    • reversible
  • common-name:
    • lysophospholipid ricinoloyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7618, ricinoleate biosynthesis:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6433, hydroxylated fatty acid biosynthesis (plants):
    • 17 reactions found over 22 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-11757&oldid=77190"