Difference between revisions of "RXN-11783"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=URIDINEKIN-RXN URIDINEKIN-RXN] == * direction: ** left-to-right * common-name: ** uridine kinase *...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=IDS2 IDS2] == * direction: ** left-to-right * common-name: ** dimethylallyl-diphosphate synthase ==...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=URIDINEKIN-RXN URIDINEKIN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=IDS2 IDS2] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** uridine kinase
+
** dimethylallyl-diphosphate synthase
* ec-number:
 
** [http://enzyme.expasy.org/EC/2.7.1.48 ec-2.7.1.48]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ATP]][c] '''+''' 1 [[URIDINE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UMP]][c]
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* 1.0 [[HYDROXY-METHYL-BUTENYL-DIP]][h] '''+''' 1.0 [[NADPH]][h] '''+''' 1.0 [[PROTON]][h] '''=>''' 1.0 [[CPD-4211]][h] '''+''' 1.0 [[NADP]][h] '''+''' 1.0 [[WATER]][h]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ15690]]
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* Gene: [[SJ04795]]
** Category: [[annotation]]
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** Category: [[orthology]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ16689]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ02034]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ06565]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7193]], pyrimidine ribonucleosides salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7193 PWY-7193]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16826 16826]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R00964 R00964]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/P0A8F4 P0A8F4]
 
** [http://www.uniprot.org/uniprot/P47622 P47622]
 
** [http://www.uniprot.org/uniprot/Q9CF21 Q9CF21]
 
** [http://www.uniprot.org/uniprot/P44533 P44533]
 
** [http://www.uniprot.org/uniprot/P27515 P27515]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=uridine kinase}}
+
{{#set: common-name=dimethylallyl-diphosphate synthase}}
{{#set: ec-number=ec-2.7.1.48}}
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{{#set: nb gene associated=1}}
{{#set: nb gene associated=4}}
+
{{#set: nb pathway associated=0}}
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 14:28, 26 August 2019

Reaction IDS2

  • direction:
    • left-to-right
  • common-name:
    • dimethylallyl-diphosphate synthase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links