Difference between revisions of "RXN-11820-STEARIC ACID/HYDROGEN-PEROXIDE//R-2-HYDROXYSTEARATE/WATER.58."

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(Created page with "Category:reaction == Reaction RXN-15130 == * direction: ** left-to-right * common-name: ** cystathionine gamma-lyase ** cystathionine γ-lyase * ec-number: ** [http:/...")
(Created page with "Category:reaction == Reaction RXN-11820-STEARIC_ACID/HYDROGEN-PEROXIDE//R-2-HYDROXYSTEARATE/WATER.58. == * direction: ** left-to-right == Reaction formula == * 1.0 HYDRO...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN-15130 ==
+
== Reaction RXN-11820-STEARIC_ACID/HYDROGEN-PEROXIDE//R-2-HYDROXYSTEARATE/WATER.58. ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** cystathionine gamma-lyase
 
−
** cystathionine γ-lyase
 
−
* ec-number:
 
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** [http://enzyme.expasy.org/EC/4.4.1.1 ec-4.4.1.1]
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[L-CYSTATHIONINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[2-OXOBUTANOATE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[CYS]][c]
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* 1.0 [[HYDROGEN-PEROXIDE]][c] '''+''' 1.0 [[STEARIC_ACID]][c] '''=>''' 1.0 [[R-2-HYDROXYSTEARATE]][c] '''+''' 1.0 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ05358]]
 
−
** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[SJ05357]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ20026]]
 
−
** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-801]], homocysteine and cysteine interconversion:
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR97012
 
−
* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R01001 R01001]
 
−
* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P21357 P21357]
 
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** [http://www.uniprot.org/uniprot/P18757 P18757]
 
−
** [http://www.uniprot.org/uniprot/P32929 P32929]
 
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** [http://www.uniprot.org/uniprot/P31373 P31373]
 
−
** [http://www.uniprot.org/uniprot/Q47847 Q47847]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=cystathionine gamma-lyase|cystathionine γ-lyase}}
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{{#set: nb gene associated=0}}
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{{#set: ec-number=ec-4.4.1.1}}
+
{{#set: nb pathway associated=0}}
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{{#set: nb gene associated=3}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction tool=meneco}}
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{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 

Latest revision as of 11:20, 18 March 2021

Reaction RXN-11820-STEARIC_ACID/HYDROGEN-PEROXIDE//R-2-HYDROXYSTEARATE/WATER.58.

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-11820-STEARIC_ACID/HYDROGEN-PEROXIDE//R-2-HYDROXYSTEARATE/WATER.58.&oldid=140952"