Difference between revisions of "RXN-11820-STEARIC ACID/HYDROGEN-PEROXIDE//R-2-HYDROXYSTEARATE/WATER.58."

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(Created page with "Category:reaction == Reaction RXN-8675 == * direction: ** left-to-right * common-name: ** s-adenosyl-l-methionine:precorrin-1 c-methyltransferase * synonymous: ** uroporph...")
(Created page with "Category:reaction == Reaction RXN-11820-STEARIC_ACID/HYDROGEN-PEROXIDE//R-2-HYDROXYSTEARATE/WATER.58. == * direction: ** left-to-right == Reaction formula == * 1.0 HYDRO...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN-8675 ==
+
== Reaction RXN-11820-STEARIC_ACID/HYDROGEN-PEROXIDE//R-2-HYDROXYSTEARATE/WATER.58. ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
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** s-adenosyl-l-methionine:precorrin-1 c-methyltransferase
 
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* synonymous:
 
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** uroporphyrinogen methyltransferase
 
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** uroporphyrinogen-iii methyltransferase
 
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** s-adenosyl-l-methionine-dependent uroporphyrinogen iii methylase
 
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** sira
 
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** adenosylmethionine-uroporphyrinogen iii methyltransferase
 
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** s-adenosyl-l-methionine:uroporphyrin-iii c-methyltransferase (incorrect)
 
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** uroporphyrin-iii c-methyltransferase (incorrect)
 
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** cysg
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[CPD-9038]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[DIHYDROSIROHYDROCHLORIN]][c]
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* 1.0 [[HYDROGEN-PEROXIDE]][c] '''+''' 1.0 [[STEARIC_ACID]][c] '''=>''' 1.0 [[R-2-HYDROXYSTEARATE]][c] '''+''' 1.0 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ12313]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-7376]], cob(II)yrinate a,c-diamide biosynthesis II (late cobalt incorporation):
 
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** '''2''' reactions found over '''13''' reactions in the full pathway
 
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* [[PWY-7377]], cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion):
 
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** '''4''' reactions found over '''15''' reactions in the full pathway
 
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* [[PWY-5196]], factor 430 biosynthesis:
 
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** '''3''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-5194]], siroheme biosynthesis:
 
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** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21973 21973]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R07238 R07238]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
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{{#set: common-name=s-adenosyl-l-methionine:precorrin-1 c-methyltransferase}}
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{{#set: nb gene associated=0}}
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{{#set: synonymous=uroporphyrinogen methyltransferase|uroporphyrin-iii c-methyltransferase (incorrect)|uroporphyrinogen-iii methyltransferase|s-adenosyl-l-methionine-dependent uroporphyrinogen iii methylase|cysg|sira|adenosylmethionine-uroporphyrinogen iii methyltransferase|s-adenosyl-l-methionine:uroporphyrin-iii c-methyltransferase (incorrect)}}
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{{#set: nb pathway associated=0}}
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{{#set: nb gene associated=1}}
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{{#set: reconstruction category=gap-filling}}
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{{#set: nb pathway associated=4}}
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{{#set: reconstruction tool=meneco}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction comment=added for gapfilling}}
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{{#set: reconstruction tool=pathwaytools|pantograph}}
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{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
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{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Latest revision as of 11:20, 18 March 2021

Reaction RXN-11820-STEARIC_ACID/HYDROGEN-PEROXIDE//R-2-HYDROXYSTEARATE/WATER.58.

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-11820-STEARIC_ACID/HYDROGEN-PEROXIDE//R-2-HYDROXYSTEARATE/WATER.58.&oldid=140952"