Difference between revisions of "RXN-11820-STEARIC ACID/HYDROGEN-PEROXIDE//R-2-HYDROXYSTEARATE/WATER.58."

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TAGAKIN-RXN TAGAKIN-RXN] == * direction: ** left-to-right * common-name: ** tagatose-6-phosphate ki...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17917 RXN-17917] == * direction: ** left-to-right * common-name: ** dna ligase (atp) == Reactio...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TAGAKIN-RXN TAGAKIN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17917 RXN-17917] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** tagatose-6-phosphate kinase
+
** dna ligase (atp)
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/2.7.1.144 ec-2.7.1.144]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[TAGATOSE-6-PHOSPHATE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[TAGATOSE-1-6-DIPHOSPHATE]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[DNA-Ligase-L-lysine]][c] '''=>''' 1 [[DNA-Ligase-L-lysine-adenylate]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03418]]
+
* Gene: [[SJ15543]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ16080]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ13521]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[GALACTITOLCAT-PWY]], galactitol degradation: [http://metacyc.org/META/NEW-IMAGE?object=GALACTITOLCAT-PWY GALACTITOLCAT-PWY]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7395]], D-galactosamine and N-acetyl-D-galactosamine degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7395 PWY-7395]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7077]], N-acetyl-D-galactosamine degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7077 PWY-7077]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[LACTOSECAT-PWY]], lactose and galactose degradation I: [http://metacyc.org/META/NEW-IMAGE?object=LACTOSECAT-PWY LACTOSECAT-PWY]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12421 12421]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03236 R03236]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=tagatose-6-phosphate kinase}}
+
{{#set: common-name=dna ligase (atp)}}
−
{{#set: ec-number=ec-2.7.1.144}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb pathway associated=4}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 09:31, 27 August 2019

Reaction RXN-17917

  • direction:
    • left-to-right
  • common-name:
    • dna ligase (atp)

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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