Difference between revisions of "RXN-11841"
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(Created page with "Category:reaction == Reaction 1.11.1.15-RXN == * direction: ** left-to-right * common-name: ** peroxiredoxin * ec-number: ** [http://enzyme.expasy.org/EC/1.11.1.15 ec-1.11...") |
(Created page with "Category:reaction == Reaction PHOSMANMUT-RXN == * direction: ** reversible * common-name: ** phosphomannomutase * ec-number: ** [http://enzyme.expasy.org/EC/5.4.2.8 ec-5.4...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction PHOSMANMUT-RXN == |
* direction: | * direction: | ||
− | ** | + | ** reversible |
* common-name: | * common-name: | ||
− | ** | + | ** phosphomannomutase |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/5.4.2.8 ec-5.4.2.8] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[MANNOSE-1P]][c] '''<=>''' 1 [[CPD-15979]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | + | * Gene: [[SJ02279]] | |
− | * Gene: [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | * | + | ** Category: [[orthology]] |
− | ** | + | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
− | *** Source: [[ | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
− | * Gene: [[ | + | * Gene: [[SJ14545]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
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** Category: [[orthology]] | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
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== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PWY-5659]], GDP-mannose biosynthesis: | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-7456]], β-(1,4)-mannan degradation: | ||
+ | ** '''2''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-7586]], β-1,4-D-mannosyl-N-acetyl-D-glucosamine degradation: | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-882]], L-ascorbate biosynthesis I (plants, L-galactose pathway): | ||
+ | ** '''6''' reactions found over '''5''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
+ | * METANETX-RXN : MNXR101729 | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11143 11143] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01818 R01818] |
− | {{#set: direction= | + | * UNIPROT: |
− | {{#set: common-name= | + | ** [http://www.uniprot.org/uniprot/P26276 P26276] |
− | {{#set: ec-number=ec- | + | ** [http://www.uniprot.org/uniprot/P29955 P29955] |
− | {{#set: nb gene associated= | + | ** [http://www.uniprot.org/uniprot/P24175 P24175] |
− | {{#set: nb pathway associated= | + | ** [http://www.uniprot.org/uniprot/P07283 P07283] |
− | {{#set: reconstruction category=annotation | + | ** [http://www.uniprot.org/uniprot/P47723 P47723] |
− | {{#set: reconstruction tool=pathwaytools | + | ** [http://www.uniprot.org/uniprot/Q57842 Q57842] |
+ | ** [http://www.uniprot.org/uniprot/P47299 P47299] | ||
+ | ** [http://www.uniprot.org/uniprot/Q59428 Q59428] | ||
+ | ** [http://www.uniprot.org/uniprot/Q06951 Q06951] | ||
+ | ** [http://www.uniprot.org/uniprot/Q49913 Q49913] | ||
+ | ** [http://www.uniprot.org/uniprot/P75050 P75050] | ||
+ | ** [http://www.uniprot.org/uniprot/Q51847 Q51847] | ||
+ | {{#set: direction=reversible}} | ||
+ | {{#set: common-name=phosphomannomutase}} | ||
+ | {{#set: ec-number=ec-5.4.2.8}} | ||
+ | {{#set: nb gene associated=2}} | ||
+ | {{#set: nb pathway associated=4}} | ||
+ | {{#set: reconstruction category=orthology|annotation}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}} |
Revision as of 08:36, 15 March 2021
Contents
Reaction PHOSMANMUT-RXN
- direction:
- reversible
- common-name:
- phosphomannomutase
- ec-number:
Reaction formula
- 1 MANNOSE-1P[c] <=> 1 CPD-15979[c]
Gene(s) associated with this reaction
- Gene: SJ02279
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ14545
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-5659, GDP-mannose biosynthesis:
- 3 reactions found over 4 reactions in the full pathway
- PWY-7456, β-(1,4)-mannan degradation:
- 2 reactions found over 7 reactions in the full pathway
- PWY-7586, β-1,4-D-mannosyl-N-acetyl-D-glucosamine degradation:
- 2 reactions found over 3 reactions in the full pathway
- PWY-882, L-ascorbate biosynthesis I (plants, L-galactose pathway):
- 6 reactions found over 5 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
- METANETX-RXN : MNXR101729
- RHEA:
- LIGAND-RXN:
- UNIPROT: