Difference between revisions of "RXN-11843"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=OHMETPYRKIN-RXN OHMETPYRKIN-RXN] == * direction: ** left-to-right * common-name: ** hydroxymethylpy...")
(Created page with "Category:reaction == Reaction RXN-11843 == * direction: ** left-to-right * common-name: ** 23s rrna pseudouridine746 synthase * ec-number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=OHMETPYRKIN-RXN OHMETPYRKIN-RXN] ==
+
== Reaction RXN-11843 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** hydroxymethylpyrimidine kinase
+
** 23s rrna pseudouridine746 synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.1.49 ec-2.7.1.49]
+
** [http://enzyme.expasy.org/EC/5.4.99.29 ec-5.4.99.29]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[HMP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[AMINO-HYDROXYMETHYL-METHYL-PYR-P]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[23S-rRNA-uridine746]][c] '''=>''' 1 [[23S-rRNA-pseudouridine746]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ18183]]
+
* Gene: [[SJ18426]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ19705]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6910]], hydroxymethylpyrimidine salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6910 PWY-6910]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-7357]], thiamine formation from pyrithiamine and oxythiamine (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7357 PWY-7357]
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7356]], thiamine salvage IV (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7356 PWY-7356]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR117190
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23097 23097]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=42549 42549]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03471 R03471]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/O48881 O48881]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=hydroxymethylpyrimidine kinase}}
+
{{#set: common-name=23s rrna pseudouridine746 synthase}}
−
{{#set: ec-number=ec-2.7.1.49}}
+
{{#set: ec-number=ec-5.4.99.29}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:20, 18 March 2021

Reaction RXN-11843

  • direction:
    • left-to-right
  • common-name:
    • 23s rrna pseudouridine746 synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR117190
  • RHEA:





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