Difference between revisions of "RXN-11856"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-17008 == * direction: ** left-to-right * common-name: ** 1-acylglycerol-3-phosphate o-acyltransferase * ec-number: ** [http://enzyme.expa...")
(Created page with "Category:reaction == Reaction GLUTATHIONE-PEROXIDASE-RXN == * direction: ** left-to-right * common-name: ** glutathione peroxidase * ec-number: ** [http://enzyme.expasy.or...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-17008 ==
+
== Reaction GLUTATHIONE-PEROXIDASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 1-acylglycerol-3-phosphate o-acyltransferase
+
** glutathione peroxidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.51 ec-2.3.1.51]
+
** [http://enzyme.expasy.org/EC/1.11.1.9 ec-1.11.1.9]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[1-PALMITOYLGLYCEROL-3-PHOSPHATE]][c] '''+''' 1 [[CPD-10269]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[CPD-18350]][c]
+
* 2 [[GLUTATHIONE]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''=>''' 1 [[OXIDIZED-GLUTATHIONE]][c] '''+''' 2 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* Gene: [[SJ13643]]
+
* Gene: [[SJ06139]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ01857]]
+
* Gene: [[SJ16746]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ08831]]
+
* Gene: [[SJ20157]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ02437]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ17873]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ15136]]
+
* Gene: [[SJ08182]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ09888]]
+
* Gene: [[SJ01572]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ13801]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ20565]]
+
* Gene: [[SJ12557]]
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ13501]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ10647]]
+
* Gene: [[SJ21059]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ18009]]
+
* Gene: [[SJ14909]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ12662]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
</div>
 
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[DETOX1-PWY-1]], reactive oxygen species degradation:
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-4081]], glutathione-peroxide redox reactions:
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* METANETX-RXN : MNXR100446
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16834 16834]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00274 R00274]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q7M355 Q7M355]
 +
** [http://www.uniprot.org/uniprot/P18283 P18283]
 +
** [http://www.uniprot.org/uniprot/P46412 P46412]
 +
** [http://www.uniprot.org/uniprot/Q64625 Q64625]
 +
** [http://www.uniprot.org/uniprot/P0A0T5 P0A0T5]
 +
** [http://www.uniprot.org/uniprot/P0A0T4 P0A0T4]
 +
** [http://www.uniprot.org/uniprot/P22352 P22352]
 +
** [http://www.uniprot.org/uniprot/P23764 P23764]
 +
** [http://www.uniprot.org/uniprot/P37141 P37141]
 +
** [http://www.uniprot.org/uniprot/P00435 P00435]
 +
** [http://www.uniprot.org/uniprot/P07203 P07203]
 +
** [http://www.uniprot.org/uniprot/P11352 P11352]
 +
** [http://www.uniprot.org/uniprot/P04041 P04041]
 +
** [http://www.uniprot.org/uniprot/P11909 P11909]
 +
** [http://www.uniprot.org/uniprot/P30708 P30708]
 +
** [http://www.uniprot.org/uniprot/P67878 P67878]
 +
** [http://www.uniprot.org/uniprot/P28714 P28714]
 +
** [http://www.uniprot.org/uniprot/P30710 P30710]
 +
** [http://www.uniprot.org/uniprot/Q06652 Q06652]
 +
** [http://www.uniprot.org/uniprot/P38143 P38143]
 +
** [http://www.uniprot.org/uniprot/P40581 P40581]
 +
** [http://www.uniprot.org/uniprot/Q38703 Q38703]
 +
** [http://www.uniprot.org/uniprot/P35666 P35666]
 +
** [http://www.uniprot.org/uniprot/P67877 P67877]
 +
** [http://www.uniprot.org/uniprot/Q7M448 Q7M448]
 +
** [http://www.uniprot.org/uniprot/P73824 P73824]
 +
** [http://www.uniprot.org/uniprot/Q9SZ54 Q9SZ54]
 +
** [http://www.uniprot.org/uniprot/O24296 O24296]
 +
** [http://www.uniprot.org/uniprot/O24032 O24032]
 +
** [http://www.uniprot.org/uniprot/O22448 O22448]
 +
** [http://www.uniprot.org/uniprot/O23968 O23968]
 +
** [http://www.uniprot.org/uniprot/O23970 O23970]
 +
** [http://www.uniprot.org/uniprot/Q98234 Q98234]
 +
** [http://www.uniprot.org/uniprot/O59858 O59858]
 +
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=1-acylglycerol-3-phosphate o-acyltransferase}}
+
{{#set: common-name=glutathione peroxidase}}
−
{{#set: ec-number=ec-2.3.1.51}}
+
{{#set: ec-number=ec-1.11.1.9}}
−
{{#set: nb gene associated=10}}
+
{{#set: nb gene associated=11}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 08:34, 15 March 2021

Reaction GLUTATHIONE-PEROXIDASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • glutathione peroxidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • DETOX1-PWY-1, reactive oxygen species degradation:
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-4081, glutathione-peroxide redox reactions:
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-11856&oldid=127855"