Difference between revisions of "RXN-11856"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.27-RXN 3.5.1.27-RXN] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.o...") |
(Created page with "Category:reaction == Reaction RXN-11856 == * direction: ** left-to-right * common-name: ** trna (cytosine34-c5)-methyltransferase * ec-number: ** [http://enzyme.expasy.org...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction RXN-11856 == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
| + | * common-name: | ||
| + | ** trna (cytosine34-c5)-methyltransferase | ||
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/2.1.1.203 ec-2.1.1.203] |
| + | ** [http://enzyme.expasy.org/EC/2.1.1.202 ec-2.1.1.202] | ||
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[Cytosine-34-tRNA-Precursors]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[5-METHYLCYTOSINE-34-TRNA-PRECURSORS]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ20083]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| − | |||
| − | |||
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[PWY-6829]], tRNA methylation (yeast): | ||
| + | ** '''11''' reactions found over '''15''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | |||
== External links == | == External links == | ||
| − | * | + | * METANETX-RXN : MNXR117195 |
| − | * | + | * RHEA: |
| − | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=42941 42941] | |
| − | ** [http://www. | ||
| − | |||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: ec-number=ec- | + | {{#set: common-name=trna (cytosine34-c5)-methyltransferase}} |
| + | {{#set: ec-number=ec-2.1.1.203|ec-2.1.1.202}} | ||
{{#set: nb gene associated=1}} | {{#set: nb gene associated=1}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=1}} |
| − | {{#set: reconstruction category= | + | {{#set: reconstruction category=annotation}} |
| − | {{#set: reconstruction tool= | + | {{#set: reconstruction tool=pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=saccharina_japonica_genome | + | {{#set: reconstruction source=saccharina_japonica_genome}} |
Latest revision as of 11:20, 18 March 2021
Contents
Reaction RXN-11856
- direction:
- left-to-right
- common-name:
- trna (cytosine34-c5)-methyltransferase
- ec-number:
Reaction formula
- 1 Cytosine-34-tRNA-Precursors[c] + 1 S-ADENOSYLMETHIONINE[c] => 1 5-METHYLCYTOSINE-34-TRNA-PRECURSORS[c] + 1 ADENOSYL-HOMO-CYS[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: SJ20083
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6829, tRNA methylation (yeast):
- 11 reactions found over 15 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- METANETX-RXN : MNXR117195
- RHEA:
