Difference between revisions of "RXN-11865"

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(Created page with "Category:reaction == Reaction 3.1.4.1-RXN == * direction: ** left-to-right * common-name: ** phosphodiesterase i * ec-number: ** [http://enzyme.expasy.org/EC/3.1.4.1 ec-3....")
(Created page with "Category:reaction == Reaction RXN-11865 == * direction: ** left-to-right * common-name: ** trna (5-carboxymethylaminomethyluridine)-ribose methyltransferase * ec-number: *...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction 3.1.4.1-RXN ==
+
== Reaction RXN-11865 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** phosphodiesterase i
+
** trna (5-carboxymethylaminomethyluridine)-ribose methyltransferase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/3.1.4.1 ec-3.1.4.1]
+
** [http://enzyme.expasy.org/EC/2.1.1.207 ec-2.1.1.207]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[Oligonucleotides]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Nucleoside-Monophosphates]][c] '''+''' 1 [[Oligonucleotides]][c]
+
* 1 [[5-carbo-me-ami-me-ur-34-tRNALeu]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[5-CarboxyMeAmMe-2-O-MeU34-tRNALeu]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ17438]]
+
* Gene: [[SJ09745]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ08994]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ04992]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ05463]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
Line 26: Line 17:
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* UNIPROT:
+
* METANETX-RXN : MNXR117200
** [http://www.uniprot.org/uniprot/P15396 P15396]
+
* RHEA:
** [http://www.uniprot.org/uniprot/P22413 P22413]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=43089 43089]
** [http://www.uniprot.org/uniprot/Q64610 Q64610]
 
** [http://www.uniprot.org/uniprot/P97675 P97675]
 
** [http://www.uniprot.org/uniprot/P06229 P06229]
 
** [http://www.uniprot.org/uniprot/Q8IZH2 Q8IZH2]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=phosphodiesterase i}}
+
{{#set: common-name=trna (5-carboxymethylaminomethyluridine)-ribose methyltransferase}}
{{#set: ec-number=ec-3.1.4.1}}
+
{{#set: ec-number=ec-2.1.1.207}}
{{#set: nb gene associated=4}}
+
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-11865

  • direction:
    • left-to-right
  • common-name:
    • trna (5-carboxymethylaminomethyluridine)-ribose methyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR117200
  • RHEA: