Difference between revisions of "RXN-11876"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-12878 == * direction: ** left-to-right * common-name: ** glutamate dehydrogenase (ferredoxin) == Reaction formula == * 1 GLT[c] '''+'...")
(Created page with "Category:reaction == Reaction RXN-11876 == * ec-number: ** [http://enzyme.expasy.org/EC/5.5.1.9 ec-5.5.1.9] * direction: ** left-to-right == Reaction formula == * 1 CPD-...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-12878 ==
+
== Reaction RXN-11876 ==
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/5.5.1.9 ec-5.5.1.9]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** glutamate dehydrogenase (ferredoxin)
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[GLT]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c]
+
* 1 [[CPD-12850]][c] '''=>''' 1 [[CPD-12852]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ12700]]
+
* Gene: [[SJ09463]]
** Category: [[annotation]]
+
** Category: [[manual]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[reactions_add_sjap]], Tool: [[unknown-tool]], Assignment: n.a, Comment: curation sterols (girard et al.)
* Gene: [[SJ13463]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ10812]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ04921]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ04922]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-8191]], cholesterol biosynthesis (algae, late side-chain reductase):
 +
** '''11''' reactions found over '''19''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[reactions_add_sjap]]; tool: [[curation]]; comment: curation sterols (girard et al.)
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* METANETX-RXN : MNXR113463
+
* METANETX-RXN : MNXR117206
* RHEA:
+
{{#set: ec-number=ec-5.5.1.9}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32192 32192]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R10086 R10086]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=glutamate dehydrogenase (ferredoxin)}}
+
{{#set: nb gene associated=1}}
{{#set: nb gene associated=5}}
+
{{#set: nb pathway associated=1}}
{{#set: nb pathway associated=0}}
+
{{#set: reconstruction category=manual}}
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction comment=curation sterols (girard et al.)}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction source=reactions_add_sjap}}
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 

Latest revision as of 11:23, 18 March 2021

Reaction RXN-11876

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-8191, cholesterol biosynthesis (algae, late side-chain reductase):
    • 11 reactions found over 19 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR117206