Difference between revisions of "RXN-11887"

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(Created page with "Category:reaction == Reaction FADSYN-RXN == * direction: ** left-to-right * common-name: ** fmn adenylyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.7.2 ec...")
(Created page with "Category:reaction == Reaction RXN-11887 == * ec-number: ** [http://enzyme.expasy.org/EC/1.14.19.20 ec-1.14.19.20] * direction: ** left-to-right == Reaction formula == * 1...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction FADSYN-RXN ==
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== Reaction RXN-11887 ==
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/1.14.19.20 ec-1.14.19.20]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** fmn adenylyltransferase
 
−
* ec-number:
 
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** [http://enzyme.expasy.org/EC/2.7.7.2 ec-2.7.7.2]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[FMN]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[FAD]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[5-ALPHA-CHOLESTA-724-DIEN-3-BETA-OL]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CPD-8646]][c] '''+''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 2 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[SJ07922]]
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* Gene: [[SJ11625]]
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** Category: [[annotation]]
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** Category: [[manual]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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*** Source: [[reactions_add_sjap]], Tool: [[unknown-tool]], Assignment: n.a, Comment: curation sterols (girard et al.)
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* Gene: [[SJ00206]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ01760]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ01107]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY66-366]], flavin salvage:
+
* [[PWY66-4]], cholesterol biosynthesis III (via desmosterol):
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** '''2''' reactions found over '''2''' reactions in the full pathway
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** '''14''' reactions found over '''4''' reactions in the full pathway
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* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants):
+
* [[PWY-8191]], cholesterol biosynthesis (algae, late side-chain reductase):
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** '''8''' reactions found over '''9''' reactions in the full pathway
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** '''11''' reactions found over '''19''' reactions in the full pathway
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* [[PWY-6167]], flavin biosynthesis II (archaea):
 
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** '''5''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-6168]], flavin biosynthesis III (fungi):
 
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** '''7''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[manual]]; source: [[reactions_add_sjap]]; tool: [[curation]]; comment: curation sterols (girard et al.)
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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* METANETX-RXN : MNXR95501
+
* METANETX-RXN : MNXR117212
 
* RHEA:
 
* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17238 17238]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34004 34004]
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* LIGAND-RXN:
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{{#set: ec-number=ec-1.14.19.20}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00161 R00161]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9JVY5 Q9JVY5]
 
−
** [http://www.uniprot.org/uniprot/Q9PHS7 Q9PHS7]
 
−
** [http://www.uniprot.org/uniprot/Q59263 Q59263]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=fmn adenylyltransferase}}
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{{#set: nb gene associated=1}}
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{{#set: ec-number=ec-2.7.7.2}}
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{{#set: nb pathway associated=2}}
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{{#set: nb gene associated=4}}
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{{#set: reconstruction category=manual}}
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{{#set: nb pathway associated=4}}
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{{#set: reconstruction tool=curation}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction comment=curation sterols (girard et al.)}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction source=reactions_add_sjap}}
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
 

Latest revision as of 11:23, 18 March 2021

Reaction RXN-11887

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY66-4, cholesterol biosynthesis III (via desmosterol):
    • 14 reactions found over 4 reactions in the full pathway
  • PWY-8191, cholesterol biosynthesis (algae, late side-chain reductase):
    • 11 reactions found over 19 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR117212
  • RHEA:





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