Difference between revisions of "RXN-11917"

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(Created page with "Category:reaction == Reaction QUEUOSINE-TRNA-RIBOSYLTRANSFERASE-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.4.2.29 ec-2.4.2.29] ==...")
(Created page with "Category:reaction == Reaction HACD5m == * direction: ** reversible * common-name: ** 3-hydroxyacyl-coa dehydrogenase (c12:0) == Reaction formula == * 1.0 CPD0-2105[m]...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction QUEUOSINE-TRNA-RIBOSYLTRANSFERASE-RXN ==
+
== Reaction HACD5m ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
−
* ec-number:
+
* common-name:
−
** [http://enzyme.expasy.org/EC/2.4.2.29 ec-2.4.2.29]
+
** 3-hydroxyacyl-coa dehydrogenase (c12:0)
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Guanine34-in-tRNAs]][c] '''+''' 1 [[QUEUINE]][c] '''=>''' 1 [[GUANINE]][c] '''+''' 1 [[tRNAs-with-queuine]][c]
+
* 1.0 [[CPD0-2105]][m] '''+''' 1.0 [[NADH]][m] '''+''' 1.0 [[PROTON]][m] '''<=>''' 1.0 [[CPD0-2107]][m] '''+''' 1.0 [[NAD]][m]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ12245]]
+
* Gene: [[SJ03584]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ21390]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: direction=reversible}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03789 R03789]
+
{{#set: common-name=3-hydroxyacyl-coa dehydrogenase (c12:0)}}
−
* UNIPROT:
+
{{#set: nb gene associated=2}}
−
** [http://www.uniprot.org/uniprot/P44594 P44594]
 
−
** [http://www.uniprot.org/uniprot/Q9JVA4 Q9JVA4]
 
−
** [http://www.uniprot.org/uniprot/O32053 O32053]
 
−
** [http://www.uniprot.org/uniprot/P0A847 P0A847]
 
−
** [http://www.uniprot.org/uniprot/Q57878 Q57878]
 
−
** [http://www.uniprot.org/uniprot/O28787 O28787]
 
−
** [http://www.uniprot.org/uniprot/P54578 P54578]
 
−
** [http://www.uniprot.org/uniprot/Q9PNT0 Q9PNT0]
 
−
** [http://www.uniprot.org/uniprot/O67331 O67331]
 
−
** [http://www.uniprot.org/uniprot/Q9CJ54 Q9CJ54]
 
−
** [http://www.uniprot.org/uniprot/P40826 P40826]
 
−
** [http://www.uniprot.org/uniprot/Q55983 Q55983]
 
−
** [http://www.uniprot.org/uniprot/Q17361 Q17361]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: ec-number=ec-2.4.2.29}}
 
−
{{#set: nb gene associated=1}}
 
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 15:35, 5 January 2021

Reaction HACD5m

  • direction:
    • reversible
  • common-name:
    • 3-hydroxyacyl-coa dehydrogenase (c12:0)

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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