Difference between revisions of "RXN-11919"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5936 PWY-5936] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-3...")
(Created page with "Category:reaction == Reaction RXN-9003 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.39 ec-2.5.1.39] == Reaction formula == * 1 4-h...")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5936 PWY-5936] ==
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== Reaction RXN-9003 ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-33090]
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** left-to-right
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* common-name:
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* ec-number:
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** xyloglucan biosynthesis
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** [http://enzyme.expasy.org/EC/2.5.1.39 ec-2.5.1.39]
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== Reaction(s) found ==
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== Reaction formula ==
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* [[RXN-9463]]
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* 1 [[4-hydroxybenzoate]][c] '''+''' 1 [[ALL-TRANS-HEXAPRENYL-DIPHOSPHATE]][c] '''=>''' 1 [[3-HEXAPRENYL-4-HYDROXYBENZOATE]][c] '''+''' 1 [[PPI]][c]
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== Reaction(s) not found ==
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== Gene(s) associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12418 RXN-12418]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9461 RXN-9461]
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* Gene: [[SJ10418]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12415 RXN-12415]
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** Category: [[orthology]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12419 RXN-12419]
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9462 RXN-9462]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: taxonomic-range=tax-33090}}
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* Gene: [[SJ04442]]
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{{#set: common-name=xyloglucan biosynthesis}}
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** Category: [[orthology]]
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{{#set: nb reaction found=1}}
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: completion rate=0.17}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: nb total reaction=6}}
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* Gene: [[SJ03479]]
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** Category: [[orthology]]
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ19255]]
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** Category: [[orthology]]
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ10781]]
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** Category: [[orthology]]
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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</div>
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== Pathway(s) ==
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* [[PWY-7235]], superpathway of ubiquinol-6 biosynthesis (eukaryotic):
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** '''3''' reactions found over '''n.a''' reactions in the full pathway
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* [[PWY3O-19]], ubiquinol-6 biosynthesis from 4-hydroxybenzoate (eukaryotic):
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** '''4''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=44557 44557]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R05616 R05616]
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{{#set: direction=left-to-right}}
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{{#set: ec-number=ec-2.5.1.39}}
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{{#set: nb gene associated=5}}
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{{#set: nb pathway associated=2}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}

Revision as of 20:43, 18 December 2020

Reaction RXN-9003

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7235, superpathway of ubiquinol-6 biosynthesis (eukaryotic):
    • 3 reactions found over n.a reactions in the full pathway
  • PWY3O-19, ubiquinol-6 biosynthesis from 4-hydroxybenzoate (eukaryotic):
    • 4 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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