Difference between revisions of "RXN-11976"

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(Created page with "Category:reaction == Reaction RXN-12519 == * direction: ** reversible * common-name: ** peroxisomal 3,2-trans-enoyl-coa isomerase * ec-number: ** [http://enzyme.expasy.org...")
(Created page with "Category:reaction == Reaction RXN-11976 == * direction: ** left-to-right * common-name: ** torulene synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1 ec-2.5.1] =...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-12519 ==
+
== Reaction RXN-11976 ==
 
* direction:
 
* direction:
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
** peroxisomal 3,2-trans-enoyl-coa isomerase
+
** torulene synthase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/5.3.3.8 ec-5.3.3.8]
+
** [http://enzyme.expasy.org/EC/2.5.1 ec-2.5.1]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[trans-2-cis-5-dienoyl-CoA]][c] '''<=>''' 1 [[trans-3-cis-5-dienoyl-CoA]][c]
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* 1 [[CPD-12932]][c] '''=>''' 1 [[CPD-7953]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ11169]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ07211]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6837]], fatty acid &beta;-oxidation V (unsaturated, odd number, di-isomerase-dependent):
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* [[PWY-6681]], neurosporaxanthin biosynthesis:
** '''4''' reactions found over '''5''' reactions in the full pathway
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** '''3''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
 
== External links  ==
 
== External links  ==
{{#set: direction=reversible}}
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* LIGAND-RXN:
{{#set: common-name=peroxisomal 3,2-trans-enoyl-coa isomerase}}
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** [http://www.genome.jp/dbget-bin/www_bget?R10508 R10508]
{{#set: ec-number=ec-5.3.3.8}}
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* METANETX-RXN : MNXR113843
{{#set: nb gene associated=2}}
+
{{#set: direction=left-to-right}}
 +
{{#set: common-name=torulene synthase}}
 +
{{#set: ec-number=ec-2.5.1}}
 +
{{#set: nb gene associated=0}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=gap-filling}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=meneco}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=added for gapfilling}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}

Latest revision as of 11:18, 18 March 2021

Reaction RXN-11976

  • direction:
    • left-to-right
  • common-name:
    • torulene synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6681, neurosporaxanthin biosynthesis:
    • 3 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

  • LIGAND-RXN:
  • METANETX-RXN : MNXR113843