Difference between revisions of "RXN-12019"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.24.56-RXN 3.4.24.56-RXN] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCINYLDIAMINOPIMTRANS-RXN SUCCINYLDIAMINOPIMTRANS-RXN] == * direction: ** reversible * common-nam...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCINYLDIAMINOPIMTRANS-RXN SUCCINYLDIAMINOPIMTRANS-RXN] == |
* direction: | * direction: | ||
| − | ** | + | ** reversible |
| + | * common-name: | ||
| + | ** n-succinyldiaminopimelate aminotransferase | ||
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/2.6.1.17 ec-2.6.1.17] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[N-SUCCINYLLL-2-6-DIAMINOPIMELATE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[N-SUCCINYL-2-AMINO-6-KETOPIMELATE]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ18200]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| − | * Gene: [[ | + | * Gene: [[SJ07216]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| − | * Gene: [[ | + | * Gene: [[SJ08678]] |
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** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DAPLYSINESYN-PWY DAPLYSINESYN-PWY] | ||
| + | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
| − | * | + | * RHEA: |
| − | ** [http://www. | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11963 11963] |
| − | * | + | * LIGAND-RXN: |
| − | ** [http://www. | + | ** [http://www.genome.jp/dbget-bin/www_bget?R04475 R04475] |
| − | {{#set: direction= | + | {{#set: direction=reversible}} |
| − | {{#set: ec-number=ec- | + | {{#set: common-name=n-succinyldiaminopimelate aminotransferase}} |
| − | {{#set: nb gene associated= | + | {{#set: ec-number=ec-2.6.1.17}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb gene associated=3}} |
| + | {{#set: nb pathway associated=1}} | ||
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
{{#set: reconstruction source=saccharina_japonica_genome}} | {{#set: reconstruction source=saccharina_japonica_genome}} | ||
Revision as of 14:28, 26 August 2019
Contents
Reaction SUCCINYLDIAMINOPIMTRANS-RXN
- direction:
- reversible
- common-name:
- n-succinyldiaminopimelate aminotransferase
- ec-number:
Reaction formula
- 1 2-KETOGLUTARATE[c] + 1 N-SUCCINYLLL-2-6-DIAMINOPIMELATE[c] <=> 1 GLT[c] + 1 N-SUCCINYL-2-AMINO-6-KETOPIMELATE[c]
Gene(s) associated with this reaction
- Gene: SJ18200
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ07216
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ08678
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- DAPLYSINESYN-PWY, L-lysine biosynthesis I: DAPLYSINESYN-PWY
- 7 reactions found over 9 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
