Difference between revisions of "RXN-12070"

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(Created page with "Category:reaction == Reaction RXN-12070 == * direction: ** left-to-right * common-name: ** 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase * ec-number: ** [http://enzyme.exp...")
(Created page with "Category:reaction == Reaction ADENYLYLSULFATE-REDUCTASE-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/1.8.99.2 ec-1.8.99.2] == Reaction fo...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-12070 ==
+
== Reaction ADENYLYLSULFATE-REDUCTASE-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
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** reversible
−
* common-name:
 
−
** 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.7.1.14 ec-3.7.1.14]
+
** [http://enzyme.expasy.org/EC/1.8.99.2 ec-1.8.99.2]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD0-2184]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-14447]][c] '''+''' 1 [[FUM]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[AMP]][c] '''+''' 1 [[Acceptor]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[SO3]][c] '''<=>''' 1 [[APS]][c] '''+''' 1 [[Donor-H2]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ20125]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6690]], cinnamate and 3-hydroxycinnamate degradation to 2-hydroxypentadienoate:
+
* [[DISSULFRED-PWY]], dissimilatory sulfate reduction I (to hydrogen sufide)):
−
** '''1''' reactions found over '''5''' reactions in the full pathway
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** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[P224-PWY]]:
 +
** '''2''' reactions found over '''n.a''' reactions in the full pathway
 +
* [[PWY-5278]], sulfite oxidation III:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5279]], sulfite oxidation II:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR115674
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25047 25047]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24243 24243]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R06789 R06789]
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** [http://www.genome.jp/dbget-bin/www_bget?R00860 R00860]
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{{#set: direction=left-to-right}}
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* UNIPROT:
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{{#set: common-name=2-hydroxy-6-oxonona-2,4-dienedioate hydrolase}}
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** [http://www.uniprot.org/uniprot/O28604 O28604]
−
{{#set: ec-number=ec-3.7.1.14}}
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** [http://www.uniprot.org/uniprot/O28603 O28603]
−
{{#set: nb gene associated=1}}
+
{{#set: direction=reversible}}
−
{{#set: nb pathway associated=1}}
+
{{#set: ec-number=ec-1.8.99.2}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: nb gene associated=0}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: nb pathway associated=4}}
−
{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction tool=meneco}}
 +
{{#set: reconstruction comment=added for gapfilling}}
 +
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}

Revision as of 08:38, 15 March 2021

Reaction ADENYLYLSULFATE-REDUCTASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • DISSULFRED-PWY, dissimilatory sulfate reduction I (to hydrogen sufide)):
    • 2 reactions found over 4 reactions in the full pathway
  • P224-PWY:
    • 2 reactions found over n.a reactions in the full pathway
  • PWY-5278, sulfite oxidation III:
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-5279, sulfite oxidation II:
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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