Difference between revisions of "RXN-12070"

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(Created page with "Category:reaction == Reaction RXN-14728 == * direction: ** left-to-right * common-name: ** amidase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.1.4 ec-3.5.1.4] == Reac...")
(Created page with "Category:reaction == Reaction GLUCISOM-RXN == * direction: ** reversible * common-name: ** glucose isomerase * ec-number: ** [http://enzyme.expasy.org/EC/5.3.1.5 ec-5.3.1....")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-14728 ==
+
== Reaction GLUCISOM-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** amidase
+
** glucose isomerase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.5.1.4 ec-3.5.1.4]
+
** [http://enzyme.expasy.org/EC/5.3.1.5 ec-5.3.1.5]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ACETAMIDE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ACET]][c] '''+''' 1 [[AMMONIUM]][c]
+
* 1 [[Glucopyranose]][c] '''<=>''' 1 [[CPD-15382]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ22527]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ16279]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ11012]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ01848]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00321 R00321]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00307 R00307]
−
{{#set: direction=left-to-right}}
+
* RHEA:
−
{{#set: common-name=amidase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28549 28549]
−
{{#set: ec-number=ec-3.5.1.4}}
+
* UNIPROT:
−
{{#set: nb gene associated=4}}
+
** [http://www.uniprot.org/uniprot/P19149 P19149]
 +
** [http://www.uniprot.org/uniprot/P24300 P24300]
 +
** [http://www.uniprot.org/uniprot/Q9CFG7 Q9CFG7]
 +
** [http://www.uniprot.org/uniprot/P29441 P29441]
 +
** [http://www.uniprot.org/uniprot/P04788 P04788]
 +
** [http://www.uniprot.org/uniprot/P19148 P19148]
 +
** [http://www.uniprot.org/uniprot/P00944 P00944]
 +
** [http://www.uniprot.org/uniprot/P44398 P44398]
 +
** [http://www.uniprot.org/uniprot/P29442 P29442]
 +
** [http://www.uniprot.org/uniprot/P10654 P10654]
 +
** [http://www.uniprot.org/uniprot/P12851 P12851]
 +
** [http://www.uniprot.org/uniprot/P22857 P22857]
 +
** [http://www.uniprot.org/uniprot/P09033 P09033]
 +
** [http://www.uniprot.org/uniprot/P29443 P29443]
 +
** [http://www.uniprot.org/uniprot/Q7M0V2 Q7M0V2]
 +
** [http://www.uniprot.org/uniprot/Q7M0V4 Q7M0V4]
 +
** [http://www.uniprot.org/uniprot/Q7M0V3 Q7M0V3]
 +
** [http://www.uniprot.org/uniprot/P12070 P12070]
 +
** [http://www.uniprot.org/uniprot/P27157 P27157]
 +
** [http://www.uniprot.org/uniprot/P21938 P21938]
 +
** [http://www.uniprot.org/uniprot/P15587 P15587]
 +
** [http://www.uniprot.org/uniprot/Q40082 Q40082]
 +
</div>
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=glucose isomerase}}
 +
{{#set: ec-number=ec-5.3.1.5}}
 +
{{#set: nb gene associated=0}}
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}

Revision as of 15:06, 5 January 2021

Reaction GLUCISOM-RXN

  • direction:
    • reversible
  • common-name:
    • glucose isomerase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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