Difference between revisions of "RXN-12116"

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(Created page with "Category:reaction == Reaction BRANCHED-CHAINAMINOTRANSFERILEU-RXN == * direction: ** reversible * common-name: ** isoleucine transaminase * ec-number: ** [http://enzyme.ex...")
(Created page with "Category:reaction == Reaction LTAA-RXN == * direction: ** left-to-right * common-name: ** l-allo-threonine aldolase * ec-number: ** [http://enzyme.expasy.org/EC/4.1.2.48 e...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction BRANCHED-CHAINAMINOTRANSFERILEU-RXN ==
+
== Reaction LTAA-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** isoleucine transaminase
+
** l-allo-threonine aldolase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.6.1.42 ec-2.6.1.42]
+
** [http://enzyme.expasy.org/EC/4.1.2.48 ec-4.1.2.48]
 +
** [http://enzyme.expasy.org/EC/4.1.2.49 ec-4.1.2.49]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[ILE]][c] '''<=>''' 1 [[2-KETO-3-METHYL-VALERATE]][c] '''+''' 1 [[GLT]][c]
+
* 1 [[L-ALLO-THREONINE]][c] '''=>''' 1 [[ACETALD]][c] '''+''' 1 [[GLY]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ06446]]
−
* Gene: [[SJ04586]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ12304]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ06412]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ13018]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ17677]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine):
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[ILEUDEG-PWY]], L-isoleucine degradation I:
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5078]], L-isoleucine degradation II:
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5103]], L-isoleucine biosynthesis III:
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-5104]], L-isoleucine biosynthesis IV:
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5101]], L-isoleucine biosynthesis II:
 
−
** '''4''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5108]], L-isoleucine biosynthesis V:
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR104834
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24804 24804]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26209 26209]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02199 R02199]
+
** [http://www.genome.jp/dbget-bin/www_bget?R06171 R06171]
−
* UNIPROT:
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/Q9PIM6 Q9PIM6]
+
{{#set: common-name=l-allo-threonine aldolase}}
−
** [http://www.uniprot.org/uniprot/P38891 P38891]
+
{{#set: ec-number=ec-4.1.2.49|ec-4.1.2.48}}
−
** [http://www.uniprot.org/uniprot/P47176 P47176]
+
{{#set: nb gene associated=2}}
−
** [http://www.uniprot.org/uniprot/O86505 O86505]
+
{{#set: nb pathway associated=0}}
−
** [http://www.uniprot.org/uniprot/O14370 O14370]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/O32954 O32954]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/P0AB80 P0AB80]
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=isoleucine transaminase}}
 
−
{{#set: ec-number=ec-2.6.1.42}}
 
−
{{#set: nb gene associated=4}}
 
−
{{#set: nb pathway associated=7}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 08:36, 15 March 2021

Reaction LTAA-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR104834
  • RHEA:
  • LIGAND-RXN:





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