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| − | [[Category:reaction]] | + | [[Category:pathway]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTOLDEHYD-RXN HISTOLDEHYD-RXN] == | + | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=ANAGLYCOLYSIS-PWY ANAGLYCOLYSIS-PWY] == |
| − | * direction: | + | * taxonomic-range: |
| − | ** reversible | + | ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2759 tax-2759] |
| | + | ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2] |
| | * common-name: | | * common-name: |
| − | ** histidinol dehydrogenase | + | ** glycolysis iii (from glucose) |
| − | == Reaction formula == | + | == Reaction(s) found == |
| − | * 1 [[HISTIDINOL]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[HISTIDINAL]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
| + | * [[2PGADEHYDRAT-RXN]] |
| − | == Gene(s) associated with this reaction ==
| + | * [[6PFRUCTPHOS-RXN]] |
| − | * Gene: [[SJ07444]] | + | * [[F16ALDOLASE-RXN]] |
| − | ** Category: [[annotation]] | + | * [[GAPOXNPHOSPHN-RXN]] |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | + | * [[GLUCOKIN-RXN]] |
| − | * Gene: [[SJ18961]]
| + | * [[PEPDEPHOS-RXN]] |
| − | ** Category: [[annotation]] | + | * [[PGLUCISOM-RXN]] |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | + | * [[PHOSGLYPHOS-RXN]] |
| − | ** Category: [[orthology]]
| + | * [[RXN-15513]] |
| − | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | + | * [[TRIOSEPISOMERIZATION-RXN]] |
| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | + | == Reaction(s) not found == |
| − | * Gene: [[SJ10107]] | + | * [http://metacyc.org/META/NEW-IMAGE?object=3PGAREARR-RXN 3PGAREARR-RXN] |
| − | ** Category: [[orthology]] | + | {{#set: taxonomic-range=tax-2759|tax-2}} |
| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | + | {{#set: common-name=glycolysis iii (from glucose)}} |
| − | == Pathway(s) == | + | {{#set: nb reaction found=10}} |
| − | * [[HISTSYN-PWY]], L-histidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY] | + | {{#set: completion rate=0.91}} |
| − | ** '''10''' reactions found over '''10''' reactions in the full pathway
| + | {{#set: nb total reaction=11}} |
| − | == Reconstruction information ==
| |
| − | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
| |
| − | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
| |
| − | == External links ==
| |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| |
| − | * RHEA:
| |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33799 33799]
| |
| − | * LIGAND-RXN:
| |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R03012 R03012]
| |
| − | * UNIPROT:
| |
| − | ** [http://www.uniprot.org/uniprot/P24226 P24226]
| |
| − | ** [http://www.uniprot.org/uniprot/P44001 P44001]
| |
| − | ** [http://www.uniprot.org/uniprot/O34651 O34651]
| |
| − | ** [http://www.uniprot.org/uniprot/P63950 P63950]
| |
| − | ** [http://www.uniprot.org/uniprot/Q9RSI4 Q9RSI4]
| |
| − | ** [http://www.uniprot.org/uniprot/Q02136 Q02136]
| |
| − | ** [http://www.uniprot.org/uniprot/Q9JTH9 Q9JTH9]
| |
| − | ** [http://www.uniprot.org/uniprot/O30027 O30027]
| |
| − | ** [http://www.uniprot.org/uniprot/Q9PM77 Q9PM77]
| |
| − | ** [http://www.uniprot.org/uniprot/P10370 P10370]
| |
| − | ** [http://www.uniprot.org/uniprot/P06988 P06988]
| |
| − | ** [http://www.uniprot.org/uniprot/O66976 O66976]
| |
| − | ** [http://www.uniprot.org/uniprot/Q58851 Q58851]
| |
| − | ** [http://www.uniprot.org/uniprot/O26327 O26327]
| |
| − | ** [http://www.uniprot.org/uniprot/Q9X0D1 Q9X0D1]
| |
| − | ** [http://www.uniprot.org/uniprot/P18786 P18786]
| |
| − | ** [http://www.uniprot.org/uniprot/P28736 P28736]
| |
| − | ** [http://www.uniprot.org/uniprot/P45353 P45353]
| |
| − | ** [http://www.uniprot.org/uniprot/Q12670 Q12670]
| |
| − | ** [http://www.uniprot.org/uniprot/P72946 P72946]
| |
| − | ** [http://www.uniprot.org/uniprot/P73058 P73058]
| |
| − | ** [http://www.uniprot.org/uniprot/P00815 P00815]
| |
| − | ** [http://www.uniprot.org/uniprot/P07685 P07685]
| |
| − | ** [http://www.uniprot.org/uniprot/P16245 P16245]
| |
| − | </div>
| |
| − | {{#set: direction=reversible}} | |
| − | {{#set: common-name=histidinol dehydrogenase}} | |
| − | {{#set: nb gene associated=3}} | |
| − | {{#set: nb pathway associated=1}}
| |
| − | {{#set: reconstruction category=orthology|annotation}}
| |
| − | {{#set: reconstruction tool=pathwaytools|pantograph}}
| |
| − | {{#set: reconstruction comment=n.a}} | |
| − | {{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} | |
