Difference between revisions of "RXN-12125"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14048 RXN-14048] == * direction: ** left-to-right * common-name: ** cystathionine γ-lyase...")
(Created page with "Category:reaction == Reaction FLAVONADPREDUCT-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/1.19.1.1 ec-1.19.1.1] == Reaction formula == *...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14048 RXN-14048] ==
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== Reaction FLAVONADPREDUCT-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
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** reversible
−
* common-name:
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* ec-number:
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** cystathionine γ-lyase
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** [http://enzyme.expasy.org/EC/1.19.1.1 ec-1.19.1.1]
−
** cystathionine gamma-lyase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[L-CYSTATHIONINE]][c] '''=>''' 1 [[CPD-15056]][c] '''+''' 1 [[CYS]][c] '''+''' 1 [[PROTON]][c]
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* 1 [[NADP]][c] '''+''' 1 [[Reduced-flavodoxins]][c] '''<=>''' 1 [[NADPH]][c] '''+''' 1 [[Oxidized-flavodoxins]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ05357]]
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* Gene: [[SJ09107]]
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** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[SJ20026]]
 
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** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ05358]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[HOMOCYSDEGR-PWY]], L-cysteine biosynthesis III (from L-homocysteine): [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSDEGR-PWY HOMOCYSDEGR-PWY]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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** [http://www.genome.jp/dbget-bin/www_bget?R08632 R08632]
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* UNIPROT:
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* RHEA:
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** [http://www.uniprot.org/uniprot/P22570 P22570]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24913 24913]
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** [http://www.uniprot.org/uniprot/P24134 P24134]
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{{#set: direction=left-to-right}}
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** [http://www.uniprot.org/uniprot/P41343 P41343]
−
{{#set: common-name=cystathionine gamma-lyase|cystathionine &gamma;-lyase}}
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** [http://www.uniprot.org/uniprot/Q00598 Q00598]
−
{{#set: nb gene associated=3}}
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** [http://www.uniprot.org/uniprot/Q44532 Q44532]
−
{{#set: nb pathway associated=1}}
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** [http://www.uniprot.org/uniprot/Q9JRE3 Q9JRE3]
−
{{#set: reconstruction category=annotation|orthology}}
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** [http://www.uniprot.org/uniprot/P08165 P08165]
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
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** [http://www.uniprot.org/uniprot/Q7M1T0 Q7M1T0]
 +
** [http://www.uniprot.org/uniprot/Q7M1S9 Q7M1S9]
 +
** [http://www.uniprot.org/uniprot/P00454 P00454]
 +
** [http://www.uniprot.org/uniprot/P00455 P00455]
 +
** [http://www.uniprot.org/uniprot/P10933 P10933]
 +
** [http://www.uniprot.org/uniprot/Q7M1R4 Q7M1R4]
 +
** [http://www.uniprot.org/uniprot/P28861 P28861]
 +
** [http://www.uniprot.org/uniprot/Q41736 Q41736]
 +
** [http://www.uniprot.org/uniprot/Q61578 Q61578]
 +
** [http://www.uniprot.org/uniprot/P48360 P48360]
 +
** [http://www.uniprot.org/uniprot/Q41641 Q41641]
 +
** [http://www.uniprot.org/uniprot/Q55318 Q55318]
 +
** [http://www.uniprot.org/uniprot/O04397 O04397]
 +
** [http://www.uniprot.org/uniprot/O23877 O23877]
 +
** [http://www.uniprot.org/uniprot/P41345 P41345]
 +
** [http://www.uniprot.org/uniprot/O04977 O04977]
 +
** [http://www.uniprot.org/uniprot/P41344 P41344]
 +
** [http://www.uniprot.org/uniprot/O65206 O65206]
 +
** [http://www.uniprot.org/uniprot/O65208 O65208]
 +
** [http://www.uniprot.org/uniprot/P53991 P53991]
 +
** [http://www.uniprot.org/uniprot/O59710 O59710]
 +
</div>
 +
{{#set: direction=reversible}}
 +
{{#set: ec-number=ec-1.19.1.1}}
 +
{{#set: nb gene associated=1}}
 +
{{#set: nb pathway associated=0}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 20:41, 18 December 2020

Reaction FLAVONADPREDUCT-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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