Difference between revisions of "RXN-12177"

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(Created page with "Category:reaction == Reaction 3.1.4.14-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.1.4.14 ec-3.1.4.14] == Reaction formula == * 1 [...")
(Created page with "Category:reaction == Reaction RXN-12177 == * direction: ** left-to-right * common-name: ** unsaturated chondroitin 6-sulfate disaccharide hydrolase * ec-number: ** [http:/...")
 
(2 intermediate revisions by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3.1.4.14-RXN ==
+
== Reaction RXN-12177 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** unsaturated chondroitin 6-sulfate disaccharide hydrolase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.4.14 ec-3.1.4.14]
+
** [http://enzyme.expasy.org/EC/3.2.1.180 ec-3.2.1.180]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ACP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PANTETHEINE-P]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[apo-ACP]][c]
+
* 1 [[4-DEOXY-BETA-D-GLUC-4-ENURONOSYL-6S]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-12565]][c] '''+''' 1 [[CPD-13122]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ13212]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ15657]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6012]], acyl carrier protein metabolism:
+
* [[PWY-6572]], chondroitin sulfate degradation I (bacterial):
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR117396
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R10867 R10867]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20538 20538]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31650 31650]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01623 R01623]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P43013 P43013]
 
−
** [http://www.uniprot.org/uniprot/P41407 P41407]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-3.1.4.14}}
+
{{#set: common-name=unsaturated chondroitin 6-sulfate disaccharide hydrolase}}
−
{{#set: nb gene associated=0}}
+
{{#set: ec-number=ec-3.2.1.180}}
 +
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction comment=added for gapfilling}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction RXN-12177

  • direction:
    • left-to-right
  • common-name:
    • unsaturated chondroitin 6-sulfate disaccharide hydrolase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6572, chondroitin sulfate degradation I (bacterial):
    • 2 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR117396
  • LIGAND-RXN:
  • RHEA:





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