Difference between revisions of "RXN-12197"

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(Created page with "Category:reaction == Reaction MANNPDEHYDROG-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.17 ec-1.1.1.17] == Reaction formula == * 1...")
(Created page with "Category:reaction == Reaction RXN-12197 == * direction: ** left-to-right * common-name: ** nucleoside-diphosphatase ** udp phosphatase * ec-number: ** [http://enzyme.expas...")
 
(One intermediate revision by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction MANNPDEHYDROG-RXN ==
+
== Reaction RXN-12197 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 +
* common-name:
 +
** nucleoside-diphosphatase
 +
** udp phosphatase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.17 ec-1.1.1.17]
+
** [http://enzyme.expasy.org/EC/3.6.1.6 ec-3.6.1.6]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[MANNITOL-1P]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[FRUCTOSE-6P]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[UDP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[UMP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ15139]]
+
* Gene: [[SJ00842]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ20113]]
+
* Gene: [[SJ04502]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ16444]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[MANNIDEG-PWY]], mannitol degradation I:
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-6531]], mannitol cycle:
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR101931
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19664 19664]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00758 R00758]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00155 R00155]
−
* UNIPROT:
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/P09424 P09424]
+
{{#set: common-name=udp phosphatase|nucleoside-diphosphatase}}
−
** [http://www.uniprot.org/uniprot/P27543 P27543]
+
{{#set: ec-number=ec-3.6.1.6}}
−
** [http://www.uniprot.org/uniprot/Q02418 Q02418]
+
{{#set: nb gene associated=3}}
−
** [http://www.uniprot.org/uniprot/P42957 P42957]
+
{{#set: nb pathway associated=0}}
−
** [http://www.uniprot.org/uniprot/P78008 P78008]
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: direction=reversible}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
−
{{#set: ec-number=ec-1.1.1.17}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=2}}
 
−
{{#set: reconstruction category=orthology}}
 
−
{{#set: reconstruction tool=pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction RXN-12197

  • direction:
    • left-to-right
  • common-name:
    • nucleoside-diphosphatase
    • udp phosphatase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR101931
  • LIGAND-RXN:





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