Difference between revisions of "RXN-12197"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11602 RXN-11602] == * direction: ** left-to-right * common-name: ** 23s rrna m5c1962 methyltran...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12478 RXN-12478] == * direction: ** left-to-right * common-name: ** cytidine4 in trnagly(gcc) 2...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12478 RXN-12478] == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
| − | ** | + | ** cytidine4 in trnagly(gcc) 2'-o-methyltransferase |
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/2.1.1. | + | ** [http://enzyme.expasy.org/EC/2.1.1.225 ec-2.1.1.225] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[Cytidine4-tRNAGly-GCC]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[2-O-MeCytidine4-tRNAGLY-GCC]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ07716]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[PWY-6829]], tRNA methylation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6829 PWY-6829] | ||
| + | ** '''11''' reactions found over '''15''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=43193 43193] |
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: common-name= | + | {{#set: common-name=cytidine4 in trnagly(gcc) 2'-o-methyltransferase}} |
| − | {{#set: ec-number=ec-2.1.1. | + | {{#set: ec-number=ec-2.1.1.225}} |
{{#set: nb gene associated=1}} | {{#set: nb gene associated=1}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=1}} |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
{{#set: reconstruction source=saccharina_japonica_genome}} | {{#set: reconstruction source=saccharina_japonica_genome}} | ||
Revision as of 09:30, 27 August 2019
Contents
Reaction RXN-12478
- direction:
- left-to-right
- common-name:
- cytidine4 in trnagly(gcc) 2'-o-methyltransferase
- ec-number:
Reaction formula
- 1 Cytidine4-tRNAGly-GCC[c] + 1 S-ADENOSYLMETHIONINE[c] => 1 2-O-MeCytidine4-tRNAGLY-GCC[c] + 1 ADENOSYL-HOMO-CYS[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: SJ07716
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6829, tRNA methylation (yeast): PWY-6829
- 11 reactions found over 15 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- RHEA:
