Difference between revisions of "RXN-12244"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5070 PWY-5070] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-3...")
(Created page with "Category:reaction == Reaction RXN-12244 == * direction: ** left-to-right * common-name: ** 15-cis-phytoene desaturase ** 15,9'-di-cis phytofluene desaturase * synonymous:...")
 
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[[Category:pathway]]
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[[Category:reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5070 PWY-5070] ==
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== Reaction RXN-12244 ==
* taxonomic-range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-33090]
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** left-to-right
 
* common-name:
 
* common-name:
** gibberellin biosynthesis i (non c-3, non c-13 hydroxylation)
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** 15-cis-phytoene desaturase
== Reaction(s) found ==
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** 15,9'-di-cis phytofluene desaturase
* [[RXN1F-162]]
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* synonymous:
* [[RXN1F-163]]
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** phytoene desaturase (ambiguous)
* [[RXN1F-165]]
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** pds
== Reaction(s) not found ==
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** plant-type phytoene desaturase
* [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-99 RXN1F-99]
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== Reaction formula ==
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-6523 RXN-6523]
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* 1 [[CPD-13171]][c] '''+''' 1 [[PLASTOQUINONE]][c] '''=>''' 1 [[CPD-7535]][c] '''+''' 1 [[Plastoquinols]][c]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-6541 RXN-6541]
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== Gene(s) associated with this reaction  ==
* [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-164 RXN1F-164]
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* Gene: [[SJ08891]]
{{#set: taxonomic-range=tax-33090}}
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** Category: [[annotation]]
{{#set: common-name=gibberellin biosynthesis i (non c-3, non c-13 hydroxylation)}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
{{#set: nb reaction found=3}}
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== Pathway(s) ==
{{#set: completion rate=0.43}}
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* [[PWY-6475]], trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria):
{{#set: nb total reaction=7}}
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** '''8''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* METANETX-RXN : MNXR117437
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30198 30198]
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{{#set: direction=left-to-right}}
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{{#set: common-name=15-cis-phytoene desaturase|15,9'-di-cis phytofluene desaturase}}
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{{#set: synonymous=phytoene desaturase (ambiguous)|pds|plant-type phytoene desaturase}}
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{{#set: nb gene associated=1}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:22, 18 March 2021

Reaction RXN-12244

  • direction:
    • left-to-right
  • common-name:
    • 15-cis-phytoene desaturase
    • 15,9'-di-cis phytofluene desaturase
  • synonymous:
    • phytoene desaturase (ambiguous)
    • pds
    • plant-type phytoene desaturase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6475, trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria):
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR117437
  • RHEA: