Difference between revisions of "RXN-12267"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADOMET-DMK-METHYLTRANSFER-RXN ADOMET-DMK-METHYLTRANSFER-RXN] == * direction: ** left-to-right * com...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ExchangeSeed-NA+ ExchangeSeed-NA+] == * direction: ** reversible == Reaction formula == * 1.0 NA+...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADOMET-DMK-METHYLTRANSFER-RXN ADOMET-DMK-METHYLTRANSFER-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ExchangeSeed-NA+ ExchangeSeed-NA+] ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
* common-name:
 
** s-adenosylmethionine:2-demethylquinol-8 methyltransferase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/2.1.1.163 ec-2.1.1.163]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-12115]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[REDUCED-MENAQUINONE]][c]
+
* 1.0 [[NA+]][C-BOUNDARY] '''<=>''' 1.0 [[NA+]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* Gene: [[SJ02842]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ11757]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ02693]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ20751]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ07072]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ00609]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ13180]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[MENAQUINONESYN-PWY]], menaquinol-8 biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=MENAQUINONESYN-PWY MENAQUINONESYN-PWY]
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: direction=reversible}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30064 30064]
+
{{#set: nb gene associated=0}}
{{#set: direction=left-to-right}}
+
{{#set: nb pathway associated=0}}
{{#set: common-name=s-adenosylmethionine:2-demethylquinol-8 methyltransferase}}
+
{{#set: reconstruction category=manual}}
{{#set: ec-number=ec-2.1.1.163}}
+
{{#set: reconstruction tool=curation}}
{{#set: nb gene associated=7}}
+
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction source=import_from_medium}}
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Revision as of 09:31, 27 August 2019

Reaction ExchangeSeed-NA+

  • direction:
    • reversible

Reaction formula

  • 1.0 NA+[C-BOUNDARY] <=> 1.0 NA+[e]

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links