Difference between revisions of "RXN-12353"

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(Created page with "Category:reaction == Reaction RXN-11976 == * direction: ** left-to-right * common-name: ** torulene synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1 ec-2.5.1] =...")
(Created page with "Category:reaction == Reaction 2.7.7.15-RXN == * direction: ** left-to-right * common-name: ** choline-phosphate cytidylyltransferase * ec-number: ** [http://enzyme.expasy....")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-11976 ==
+
== Reaction 2.7.7.15-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** torulene synthase
+
** choline-phosphate cytidylyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.5.1 ec-2.5.1]
+
** [http://enzyme.expasy.org/EC/2.7.7.15 ec-2.7.7.15]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-12932]][c] '''=>''' 1 [[CPD-7953]][c]
+
* 1 [[CTP]][c] '''+''' 1 [[PHOSPHORYL-CHOLINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CDP-CHOLINE]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ19268]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6681]], neurosporaxanthin biosynthesis:
+
* [[PWY-7886]], cell-surface glycoconjugate-linked phosphocholine biosynthesis:
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY3O-450]], phosphatidylcholine biosynthesis I:
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-3561]], choline biosynthesis III:
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7818]], type IV lipoteichoic acid biosynthesis (S. pneumoniae):
 +
** '''2''' reactions found over '''19''' reactions in the full pathway
 +
* [[PWY4FS-2]], phosphatidylcholine biosynthesis II:
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7782]], plasmalogen biosynthesis:
 +
** '''11''' reactions found over '''16''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18998 18998]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01890 R01890]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P19836 P19836]
 +
** [http://www.uniprot.org/uniprot/P49586 P49586]
 +
** [http://www.uniprot.org/uniprot/P49584 P49584]
 +
** [http://www.uniprot.org/uniprot/P49585 P49585]
 +
** [http://www.uniprot.org/uniprot/P49587 P49587]
 +
** [http://www.uniprot.org/uniprot/P93470 P93470]
 +
** [http://www.uniprot.org/uniprot/Q42619 Q42619]
 +
** [http://www.uniprot.org/uniprot/Q42620 Q42620]
 +
** [http://www.uniprot.org/uniprot/Q42621 Q42621]
 +
** [http://www.uniprot.org/uniprot/Q42622 Q42622]
 +
** [http://www.uniprot.org/uniprot/P13259 P13259]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=torulene synthase}}
+
{{#set: common-name=choline-phosphate cytidylyltransferase}}
−
{{#set: ec-number=ec-2.5.1}}
+
{{#set: ec-number=ec-2.7.7.15}}
−
{{#set: nb gene associated=0}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=6}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
−
{{#set: reconstruction comment=added for gapfilling}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:31, 5 January 2021

Reaction 2.7.7.15-RXN

  • direction:
    • left-to-right
  • common-name:
    • choline-phosphate cytidylyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7886, cell-surface glycoconjugate-linked phosphocholine biosynthesis:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY3O-450, phosphatidylcholine biosynthesis I:
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-3561, choline biosynthesis III:
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7818, type IV lipoteichoic acid biosynthesis (S. pneumoniae):
    • 2 reactions found over 19 reactions in the full pathway
  • PWY4FS-2, phosphatidylcholine biosynthesis II:
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-7782, plasmalogen biosynthesis:
    • 11 reactions found over 16 reactions in the full pathway

Reconstruction information

External links





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