Difference between revisions of "RXN-12377"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12455 RXN-12455] == * direction: ** left-to-right * common-name: ** trna-dihydrouridine17 synth...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PAPSPAPthr PAPSPAPthr] == * direction: ** reversible * common-name: ** paps:pap antiporter, chlorop...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12455 RXN-12455] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PAPSPAPthr PAPSPAPthr] ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
** trna-dihydrouridine17 synthase
+
** paps:pap antiporter, chloroplast
* ec-number:
 
** [http://enzyme.expasy.org/EC/1.3.1.88 ec-1.3.1.88]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Uracil17-in-tRNAs]][c] '''=>''' 1 [[56-Dihydrouracil17-in-tRNAs]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
+
* 1.0 [[3-5-ADP]][c] '''+''' 1.0 [[PAPS]][h] '''<=>''' 1.0 [[3-5-ADP]][h] '''+''' 1.0 [[PAPS]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ02952]]
+
* Gene: [[SJ15431]]
** Category: [[annotation]]
+
** Category: [[orthology]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ03254]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: direction=reversible}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=53370 53370]
+
{{#set: common-name=paps:pap antiporter, chloroplast}}
{{#set: direction=left-to-right}}
+
{{#set: nb gene associated=1}}
{{#set: common-name=trna-dihydrouridine17 synthase}}
 
{{#set: ec-number=ec-1.3.1.88}}
 
{{#set: nb gene associated=2}}
 
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 14:28, 26 August 2019

Reaction PAPSPAPthr

  • direction:
    • reversible
  • common-name:
    • paps:pap antiporter, chloroplast

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links