Difference between revisions of "RXN-12380"

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(Created page with "Category:reaction == Reaction HOMOSERDEHYDROG-RXN == * direction: ** left-to-right * common-name: ** homoserine dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:reaction == Reaction RXN-9386 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/6.1.1.24 ec-6.1.1.24] == Reaction formula == * 1 ATP...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction HOMOSERDEHYDROG-RXN ==
+
== Reaction RXN-9386 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** homoserine dehydrogenase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.3 ec-1.1.1.3]
+
** [http://enzyme.expasy.org/EC/6.1.1.24 ec-6.1.1.24]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[L-ASPARTATE-SEMIALDEHYDE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[HOMO-SER]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[GLN-tRNAs]][c] '''+''' 1 [[GLT]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[L-glutamyl-tRNAGln]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ20686]]
+
* Gene: [[SJ12903]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ16019]]
+
* Gene: [[SJ07890]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ22223]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[HOMOSERSYN-PWY]], L-homoserine biosynthesis:
+
* [[PWY-5921]], glutaminyl-tRNAgln biosynthesis via transamidation:
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15759 15759]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01775 R01775]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P44505 P44505]
 
−
** [http://www.uniprot.org/uniprot/Q58997 Q58997]
 
−
** [http://www.uniprot.org/uniprot/P27725 P27725]
 
−
** [http://www.uniprot.org/uniprot/O67677 O67677]
 
−
** [http://www.uniprot.org/uniprot/P19582 P19582]
 
−
** [http://www.uniprot.org/uniprot/P00561 P00561]
 
−
** [http://www.uniprot.org/uniprot/P00562 P00562]
 
−
** [http://www.uniprot.org/uniprot/P08499 P08499]
 
−
** [http://www.uniprot.org/uniprot/Q9JR84 Q9JR84]
 
−
** [http://www.uniprot.org/uniprot/Q9PIX8 Q9PIX8]
 
−
** [http://www.uniprot.org/uniprot/P56429 P56429]
 
−
** [http://www.uniprot.org/uniprot/O27300 O27300]
 
−
** [http://www.uniprot.org/uniprot/Q9CGD8 Q9CGD8]
 
−
** [http://www.uniprot.org/uniprot/P52985 P52985]
 
−
** [http://www.uniprot.org/uniprot/P31116 P31116]
 
−
** [http://www.uniprot.org/uniprot/P37142 P37142]
 
−
** [http://www.uniprot.org/uniprot/Q9SA18 Q9SA18]
 
−
** [http://www.uniprot.org/uniprot/P52986 P52986]
 
−
** [http://www.uniprot.org/uniprot/P49079 P49079]
 
−
** [http://www.uniprot.org/uniprot/P49080 P49080]
 
−
** [http://www.uniprot.org/uniprot/P93402 P93402]
 
−
** [http://www.uniprot.org/uniprot/O81852 O81852]
 
−
** [http://www.uniprot.org/uniprot/O63067 O63067]
 
−
** [http://www.uniprot.org/uniprot/O65027 O65027]
 
−
** [http://www.uniprot.org/uniprot/P46806 P46806]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=homoserine dehydrogenase}}
+
{{#set: ec-number=ec-6.1.1.24}}
−
{{#set: ec-number=ec-1.1.1.3}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb gene associated=3}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:35, 5 January 2021

Reaction RXN-9386

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5921, glutaminyl-tRNAgln biosynthesis via transamidation:
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-12380&oldid=76910"