Difference between revisions of "RXN-12381"

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(Created page with "Category:reaction == Reaction 2.4.1.38-RXN == * direction: ** left-to-right * common-name: ** β-n-acetylglucosaminylglycopeptide β-1,4-galactosyltransferase * ec...")
(Created page with "Category:reaction == Reaction RXN-15117 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1.315 ec-2.4.1.315] == Reaction formula == * 1 ...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 2.4.1.38-RXN ==
+
== Reaction RXN-15117 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** β-n-acetylglucosaminylglycopeptide β-1,4-galactosyltransferase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.1.38 ec-2.4.1.38]
+
** [http://enzyme.expasy.org/EC/2.4.1.315 ec-2.4.1.315]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[BETA-ACETYLGLUCOSAMINIDE]][c] '''+''' 1 [[CPD-14553]][c] '''=>''' 1 [[B-Gal-14-NacGlc-R]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
+
* 1 [[CPD-12575]][c] '''+''' 1 [[D-Glucosyl-12-diacyl-glycerols]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c] '''+''' 1 [[diacyl-3-O-glucl-1-6-gluc-sn-glycerol]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ14181]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** Category: [[annotation]]
+
* Gene: [[SJ19145]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ21662]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ13674]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ18634]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ19084]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ17513]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ19257]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ17680]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ07490]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ10727]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ06688]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ11238]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ02934]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7837]], i antigen and I antigen biosynthesis:
+
* [[PWY-7817]], type I lipoteichoic acid biosynthesis (S. aureus):
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
** '''6''' reactions found over '''16''' reactions in the full pathway
−
* [[PWY-7434]], terminal O-glycans residues modification (via type 2 precursor disaccharide):
 
−
** '''5''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7831]], ABH and Lewis epitopes biosynthesis from type 2 precursor disaccharide:
 
−
** '''2''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-7833]], biosynthesis of Lewis epitopes (H. pylori):
 
−
** '''2''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22933 22933]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04495 R04495]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04377 R04377]
−
* UNIPROT:
+
* METANETX-RXN : MNXR143534
−
** [http://www.uniprot.org/uniprot/P15535 P15535]
 
−
** [http://www.uniprot.org/uniprot/P15291 P15291]
 
−
** [http://www.uniprot.org/uniprot/Q7LZ60 Q7LZ60]
 
−
** [http://www.uniprot.org/uniprot/P08037 P08037]
 
−
** [http://www.uniprot.org/uniprot/Q90580 Q90580]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=&beta;-n-acetylglucosaminylglycopeptide &beta;-1,4-galactosyltransferase}}
+
{{#set: ec-number=ec-2.4.1.315}}
−
{{#set: ec-number=ec-2.4.1.38}}
+
{{#set: nb gene associated=13}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb pathway associated=4}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}

Revision as of 08:37, 15 March 2021

Reaction RXN-15117

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7817, type I lipoteichoic acid biosynthesis (S. aureus):
    • 6 reactions found over 16 reactions in the full pathway

Reconstruction information

External links

  • LIGAND-RXN:
  • METANETX-RXN : MNXR143534





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