Difference between revisions of "RXN-12398"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16759 RXN-16759] == * direction: ** reversible * common-name: ** holo-[acyl-carrier-protein] sy...")
(Created page with "Category:reaction == Reaction RXN-12398 == * direction: ** left-to-right * common-name: ** xyloglucan xxlg oligosaccharide β-galactosidase ** beta-galactosidase ** xx...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16759 RXN-16759] ==
+
== Reaction RXN-12398 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** holo-[acyl-carrier-protein] synthase
+
** xyloglucan xxlg oligosaccharide β-galactosidase
 +
** beta-galactosidase
 +
** xxlg xyloglucan oligosaccharide β-galactosidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.8.7 ec-2.7.8.7]
+
** [http://enzyme.expasy.org/EC/3.2.1.23 ec-3.2.1.23]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CO-A]][c] '''+''' 1 [[LYS2-peptidyl-carrier-protein]][c] '''<=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[Holo-LYS2-peptidyl-carrier-protein]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CPD-13376]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-13375]][c] '''+''' 1 [[D-galactopyranose]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ19702]]
+
* Gene: [[SJ04558]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ14193]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ03139]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ00669]]
+
* Gene: [[SJ10277]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6807]], xyloglucan degradation II (exoglucanase):
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
{{#set: direction=reversible}}
+
* METANETX-RXN : MNXR117526
−
{{#set: common-name=holo-[acyl-carrier-protein] synthase}}
+
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-2.7.8.7}}
+
{{#set: common-name=xyloglucan xxlg oligosaccharide &beta;-galactosidase|beta-galactosidase|xxlg xyloglucan oligosaccharide &beta;-galactosidase}}
−
{{#set: nb gene associated=2}}
+
{{#set: ec-number=ec-3.2.1.23}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb gene associated=4}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: nb pathway associated=1}}
 +
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:18, 18 March 2021

Reaction RXN-12398

  • direction:
    • left-to-right
  • common-name:
    • xyloglucan xxlg oligosaccharide β-galactosidase
    • beta-galactosidase
    • xxlg xyloglucan oligosaccharide β-galactosidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6807, xyloglucan degradation II (exoglucanase):
    • 3 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR117526





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